Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04424 ATGGCGGCTTTCTCATCAACCTCTTGCATGTCCCTTCCAAATCCTCCCAAGTTTTCTTCTCACCGATTCAATTTCCACTCACAACAAGGAAATTTAACATGTTGGCCATTACCCAAGAAGGAAATTCAAATCTCAACGTCCAAACGCTCCTGCAAAGTGTTCAGTGATGAGTTGAATGGGAATTTTGTGGAAGACGAGAGCCACAGCTACAACATGGAAGATAAGCAATTCGTGCGTTGGTTTCGTGAGACATGGCCTTACTTGTGGGCCCATCGTGGTGCCACCTTCGTTGTCATCATTTCCGGTGAAATTGTTGCTAGTCCTTTCTTGGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTCGTTCTTGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGCCAGCCTAAGTATGTTGGTCCATATAGGATAACGGATGATGAATCTCTAGCGGCTGCAATGGAAGCAGCTGGGAGAATAAGACTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTGTAATATTCGTCGACATGGTGACAATAGCCGTTGGCATGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCCGCCAAGAGAAGAGGAGTTGTCAAAGGAATTGATTATGGGTCCACTGGGGAAGTTAAAAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATCGTTGTTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATATGCGTCATAGATGGTCCAATACTTGATGAGAATGGACACCTTATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAGCGTGTTGAGCAAAGTGAAATAGCCGCTAACTATGTGAAAGCTGTTGATGAAGAAGGTTTCAAATCTCTTGGGTATAACAATTTTAATGGGGCAGTCCGTTCTCCACAGAATGGAAAACCATTTTCAGAATGGCATAATGCAACCTTTCATAATGGCATTGGTTTTGACAGTAGGAATGGACTATGGTCTGGTGAGCAAGGTTTTGCTATTGGTGGCCAGGAGTGGCAAAGTCGAATGAATGGTTACCTGTCAGAACTGGCTGCTGCAGCCTTTGTTTGCAGAGGTGGCATTCAAAGAGTTCACTTGTTGGACGGCACTATTAGTGGAGTTCTATTGCTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGAATGGCTCAGGTAACAGATATTTCTGGAATAAAACAAATTATCCAGCCTTTGGAGGAGTCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTGCTTCATTCGTTGAGTTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCACTTTTTCCTTTCTTTGAGGAGAACTGTGGAGAGGTTGCTGGAATTGCAGTATCTCCTGATTGTCGAGGCCAAGGACAGGGAGACAAATTGCTTGATTATATAGAGAAGAAGGCATCATCTCTTGGGTTTGATATGCTTTTCCTGCTTACAACTCGTACAGCAGATTGGTTTGTGAGGCGTGGATTCTCAGAATGTTCAATTGATTCTATACCTGTGAAGAAAAGGAAAACGATTAATCTGTCCCGCAAATCTAAGTATTATATGAAGAAGCTTCTACCTAACAAGAGTGGAATTAGTGTTGGTAGGAAATTTACTTCCTCTTAG 1818 0.4351 MAAFSSTSCMSLPNPPKFSSHRFNFHSQQGNLTCWPLPKKEIQISTSKRSCKVFSDELNGNFVEDESHSYNMEDKQFVRWFRETWPYLWAHRGATFVVIISGEIVASPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGSQPKYVGPYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVKGIDYGSTGEVKKVDVSRMRERLDGGCIVVLSNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDENGHLIRFLPLQEADMLIRKRVEQSEIAANYVKAVDEEGFKSLGYNNFNGAVRSPQNGKPFSEWHNATFHNGIGFDSRNGLWSGEQGFAIGGQEWQSRMNGYLSELAAAAFVCRGGIQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQIIQPLEESGILVKRTDEELLHSLSSFIVVEREGQIIACAALFPFFEENCGEVAGIAVSPDCRGQGQGDKLLDYIEKKASSLGFDMLFLLTTRTADWFVRRGFSECSIDSIPVKKRKTINLSRKSKYYMKKLLPNKSGISVGRKFTSS* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04424 605 CDD NAT_SF 484 546 - -
Rops2g04424 605 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 446 592 IPR016181 -
Rops2g04424 605 SUPERFAMILY Carbamate kinase-like 72 439 IPR036393 -
Rops2g04424 605 Pfam Acetyltransferase (GNAT) family 479 548 IPR000182 GO:0016747
Rops2g04424 605 Pfam Amino acid kinase family 96 311 IPR001048 -
Rops2g04424 605 NCBIfam amino-acid N-acetyltransferase 398 589 IPR010167 GO:0004042|GO:0005737|GO:0006526
Rops2g04424 605 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 443 591 IPR000182 GO:0016747
Rops2g04424 605 CDD AAK_NAGS-ABP 76 437 IPR033719 -
Rops2g04424 605 Gene3D - 443 589 - -
Rops2g04424 605 Gene3D - 75 442 IPR036393 -
Rops2g04424 605 Hamap Amino-acid acetyltransferase [argA]. 72 589 IPR010167 GO:0004042|GO:0005737|GO:0006526
Rops2g04424 605 PANTHER AMINO-ACID ACETYLTRANSFERASE 45 597 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04424 Rops-Chr2 80915291 80921782 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops2g04424 AA_kinase 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04424 K14682 - gmx:100800925 1007.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01893 1 38599691 38615668 Rops2g04424 2 80915291 80921782 PCT