Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04422 ATGTCTGTCTCTCCAAACCACTCAACTCTTGACTTGCATTGTAGTGAGACAACCAGTGATTTGGTTCACTTGGACTCCAATGTGGATTTTAATGTTCTCTTGAGGGACTCCGATGGTGATGAAAGCTGTCTCTTGAACTTACTAGACTCCGAACTTGATCAAGTACATGAAAAAACAAAGTCACTAGGACAACTTCGCAAAAAAACATGGCTGGTGAATGCACGAGAAGAAGCCATAAGTTGGATCCTAAAGGTGCATGCTTACTACAGTTTTAGACCTGAGACAGCATATCTTTCTGTAAATTATCTTGATCGTTTCCTTTTGTCACACACCTTGAAGCAAGATAAAGCGTGGCCTTTGCGGTTATTATCAGTTGCTTGTTTGGCATTGGCAGCAAAAATGGAAGAAACAAAAGTGCCACTTCTATTGGACCTACAGATGATCGAGCCCGGGTTCCTATTTAAGCCAAAAACAGTTCAAAGGATGGAGCTTTTGGTTATGAGCAGTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGCTCATCTTTTCATTGCCAAGCTTTCATGCTCCGCTTCTACATTGGGAGATTTAGATTATATAGTTTCTCGTGTCTCAGATATTATCATCACCACATGTTTAGTCATGGATTTCTTAGAGTTTTCACCGTCCACAATAGCAGCAGCTGCACTTTTATGGGTAACCAATCAATATGTTGGTGACCAAAAATCAGGATGCTTCCACAAGAATATAAGCATAGAGAAGGTGCAGAAATGTTACAAACTTATGAGGCAGAAGCAGATCATTCACCGATCAGAACAATATTGGTCAAAGACCCTGCAATTATTGCCCCCAAGTCCCACCTGTGTGCTTGGTCATGCAGCTATGCAAGAAAGCATCGATGCTCACAAGCCCTGA 924 0.4167 MSVSPNHSTLDLHCSETTSDLVHLDSNVDFNVLLRDSDGDESCLLNLLDSELDQVHEKTKSLGQLRKKTWLVNAREEAISWILKVHAYYSFRPETAYLSVNYLDRFLLSHTLKQDKAWPLRLLSVACLALAAKMEETKVPLLLDLQMIEPGFLFKPKTVQRMELLVMSSLKWRLRTITPFDFAHLFIAKLSCSASTLGDLDYIVSRVSDIIITTCLVMDFLEFSPSTIAAAALLWVTNQYVGDQKSGCFHKNISIEKVQKCYKLMRQKQIIHRSEQYWSKTLQLLPPSPTCVLGHAAMQESIDAHKP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04422 307 SMART cyclin_7 80 168 IPR013763 -
Rops2g04422 307 Gene3D - 57 262 - -
Rops2g04422 307 SUPERFAMILY Cyclin-like 159 277 IPR036915 -
Rops2g04422 307 FunFam D6-type cyclin 171 263 - -
Rops2g04422 307 CDD CYCLIN_AtCycD-like_rpt2 177 265 - -
Rops2g04422 307 Pfam Cyclin, C-terminal domain 177 269 IPR004367 -
Rops2g04422 307 CDD CYCLIN_AtCycD-like_rpt1 74 172 - -
Rops2g04422 307 PANTHER CYCLINS 71 270 IPR039361 -
Rops2g04422 307 SMART Cyclin_C_2 177 302 IPR004367 -
Rops2g04422 307 SUPERFAMILY Cyclin-like 41 174 IPR036915 -
Rops2g04422 307 Gene3D - 59 175 - -
Rops2g04422 307 ProSitePatterns Cyclins signature. 75 106 IPR006671 -
Rops2g04422 307 FunFam D6-type cyclin 58 170 - -
Rops2g04422 307 Pfam Cyclin, N-terminal domain 47 174 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04422 Rops-Chr2 80853593 80855050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04422 1 270 Core Cell Cycle Gene Families AT1G70210 41.993 6.26e-62 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04422 K18810 - gmx:100799323 457.988