Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04419 ATGTCTTCCTTTGCGAAATGTTTCATGTGGTTATCTCTTGTAATCAGCACGATGCTGATCTTATCAAAACCTGCAGTTTCTTCCTATGTCATTAGGTCTTTGCCTGGGTTTCCTGGTCCCCTTCCTTTCAAATTAGAGACGGGATACATTGGAGTAGGTGAGCATGACGTTGTGCAGCTGTTTTATTACTTTGTTGAATCAGAAGGGAATCCAACAGAGGATCCTCTAATACTCTGGATGACTGGTGGCACCGGATGCTCTGGCTTGTGCGGGCTTTGGTTTGAAATAGGTCACCCGAAATATATTGCTAATCCAATCTACATTGCTGGTGATTCATATTCTGGCTTACCAGTTCCAATTGTTGCAAAATATATTTCAGATGGAAACGAAGCTGGAGAAAAACCAAAAATAAATATGAAAGGATATATTGTTGGGAACCCGGTAACAGATCTAAAAATAGATTGGAATTCTAGGATTCCATATGCTCATCGCATGGCTCTTATTTCTGACGAACTCTACAAGTCAGCAAAAATGTCTTGCAAAAGGGAGTATGTCAGAGTGAAGAAAAGCAATCTATCATGTCAGAAGGATCTCCAAGCTATCTATGAGCGCATCCATAAAATAAATCTTGAACATATCTTGGAGCCTAGTTGTCCACTTGATGACAAATGGCGAGAAGAACATAGGATTGATGATCGGAGGATTCTTCAAGGAAAATATATGGAGTTGTTGCTTTCTCCACTGAAAATCTTACATTTTGGGTGTAGAAATTATCAGAATTTATTGCTGCATGTATGGGCCAACGATGTTCATGTTCAAAAGGCACTACAAGTTCGAATGGGAACTGTGAACGGTTGGATAAGGTGTAACCGCAGCATAATTTACACAAATGATGTCCAAAGTTCTATTGCTTATCATCGTTATCTCAGAACCAAACAATTCCGGGCTCTTATATACAGTGGTGACCATGACATCGCGGTGCCATACTTGGGAACTCTCCAGTGGATCAATTCTCTGAACTCTACCATAGTGGATGATTGGAGACCTTGGGTTGTCAGCGACCAAATTGCAGGGTATATACGAGGGTACTCCAACTATATCACTTTTGCCACTGTGAAGGGAGGTGGTCACACAGCCCCAGAGTACAAGCCAAAGGAATGCTTTGAAATGTTCAAGAGGTGGATCTCTCATGAGCCTTTGTGA 1203 0.4131 MSSFAKCFMWLSLVISTMLILSKPAVSSYVIRSLPGFPGPLPFKLETGYIGVGEHDVVQLFYYFVESEGNPTEDPLILWMTGGTGCSGLCGLWFEIGHPKYIANPIYIAGDSYSGLPVPIVAKYISDGNEAGEKPKINMKGYIVGNPVTDLKIDWNSRIPYAHRMALISDELYKSAKMSCKREYVRVKKSNLSCQKDLQAIYERIHKINLEHILEPSCPLDDKWREEHRIDDRRILQGKYMELLLSPLKILHFGCRNYQNLLLHVWANDVHVQKALQVRMGTVNGWIRCNRSIIYTNDVQSSIAYHRYLRTKQFRALIYSGDHDIAVPYLGTLQWINSLNSTIVDDWRPWVVSDQIAGYIRGYSNYITFATVKGGGHTAPEYKPKECFEMFKRWISHEPL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04419 400 Gene3D alpha/beta hydrolase 25 97 IPR029058 -
Rops2g04419 400 PRINTS Carboxypeptidase C serine protease (S10) family signature 367 380 IPR001563 GO:0004185|GO:0006508
Rops2g04419 400 PRINTS Carboxypeptidase C serine protease (S10) family signature 94 119 IPR001563 GO:0004185|GO:0006508
Rops2g04419 400 Pfam Serine carboxypeptidase 93 396 IPR001563 GO:0004185|GO:0006508
Rops2g04419 400 SUPERFAMILY alpha/beta-Hydrolases 31 399 IPR029058 -
Rops2g04419 400 ProSitePatterns Serine carboxypeptidases, histidine active site. 367 384 IPR033124 GO:0004185
Rops2g04419 400 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 96 IPR001563 GO:0004185|GO:0006508
Rops2g04419 400 Gene3D alpha/beta hydrolase 98 399 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04419 Rops-Chr2 80799142 80802297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04419 25 55 Calmodulin-binding Proteins AT2G22960 58.065 5.56e-06 45.1