Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04393 ATGCGACTTCTACCATGGTTGTCCCTGTTCCTGTTCCTGCTGGGGTTGGTTTCAACGAGTGGCATCTCAGAATACCGCGCGCTACTCTCATTCAAAGCATCTTCCATAACCGACGACCCTACCAAAGCTCTCTCCTCATGGAACTCATCCACTTCTCACTGTTCCTGGCACGGCGTAACCTGCGACCCACGCCGTCACGTCACCGCCCTCAACATCTCTTCACTTTCTCTCTCCGGCGTCCTCACCGACGACCTCTCCTCCCTCCCCTTCCTCTCCCACCTCTCCCTCGCTGATAACAAGTTCTCCGGTCCCATCCCTCCCACTTTGTCCACTCTCTCCTCCCTTCGCTTCCTTAATCTCTCCAACAACATCTTCAACGGCACCTTCCCTTCACAACTCTCGCGTCTCTCCAACCTTCTAGTACTCGACCTTTATAACAACAACTTGACTGGTACTCTTCCTCTTACTGTTACCCGCATGCCACTTCTCCGTCATTTGCATCTCGGCGGCAACTTTTTCTCCGGCACGATCCCGCCGGAGTATGGTGGCTGGCGACACCTTGAATACCTCGCCGTCTCTGGCAACGAGCTCGCTGGAGTTATTCCTCCGGAGATCGGTAACCTCACCAAACTCCGGGAGCTTTACATTGGATATTACAACACCTACGACGGTGGCATCCCGCCGGAGATCGGGAACTTGTCGGAGCTGGTGAGGCTGGACGCCGCTTACTGTGGACTTTCCGGCGAGATTCCGCCGGAGATAGGGAAGCTTCAGAACCTGGATACTCTGTTTCTGCAAGTGAATGCGCTTTCGGGGTCTCTTACGCCTGAGCTTGGGAACCTTAAGAGCCTGAAGTCGATGGATTTGTCGAACAACATGCTCGCCGGCGAGGTTCCGGTGAGTTTTTCGGAGCTGAAGAACTTGACCCTTTTGAACCTGTTCAGGAACAAGCTTCATGGTGCGATTCCTGAGTTCATCGGAGAGCTACCGGCGTTGGAGGTGTTGCAACTTTGGGAGAACAACTTCACTGGAAGTATTCCTCAGAATTTGGGGAAGAATGGAAGGTTTACACTTGTTGATCTTTCTTCAAACAAATTAACTGGGTCTCTTCCACCTTATATGTGTTATGGGAATCATCTTCAGACTCTGATAACTCTGGGGAATTTCCTCTTTGGTCCCATCCCTGACTCGCTTGGAAAGTGCGAGTCTTTGAGTAGGATTCGAATGGGAGAGAACTTTCTGAATGGTTCTATTCCAAAAGGCCTTTTTGGGCTTCCAAAACTTACCCAGGTTGAGCTTCAAGATAATCTTCTCTCTGGCCAGTTTCCTGAAGCTGGTTCAATGTCTGCTAATCTTGGTCAGATTAGTCTCTCCAACAACAAGCTTTCTGGGCCTTTGCCACCCACCATTGGAAACTTCACCAGCATGCAAAAGCTTCTCCTTGATGGCAATGAGTTCACTGGTCGAATCCCTCCTGAGATTGGGAGGTTGCAACAGTTATCAAAGATTGATTTTAGCCATAACAAGTTCTCGGGTCCTATTGCTCCTGAGATCAGTCAATGCAAGTTATTAACTTTCGTTGATCTTAGCCGTAACGAGCTTTCCGGTGACATTCCAAAAGAGATCACTAGTATGCGGATATTGAATTACCTGAACCTTTCTAGGAACCACCTAGTTGGTACCATTCCAGGGTCTATTGCGTCTATGCAAAGTTTAACTGCTGTTGATTTTTCATACAATAATCTCTCTGGTTTGGTTCCTGGTACCGGCCAGTTCAGTTACTTCAACTACACGTCTTTCTTGGGAAACCCTGAACTTTGTGGCCCTTATTTGGGTCCTTGCAAAGATGGGGTTGCCAATGGCCCTCGCCAACCTCACGTTAAAGGCCCACTCTCTTCTTCCTTGAAGCTCCTTCTGGTTATTGGGTTGCTTGTGTGCTCCATTGCATTTGCTGTTGCTGCAATCTTCAAAGCTCGGTCTTTGAAGAAGGCCAGTGAAGCTCGTGCATGGAAATTAACTGCATTCCAACGTTTGGACTTCACTGTCGATGATGTTTTGGATAGCTTGAAAGAGGACAACATAATAGGTAAAGGAGGTGCAGGAATTGTTTACAAGGGGACAATGTCAAATGGAGATCAAGTGGCTGTGAAAAGGTTACCAGCTATGAGCAGAGGCTCTTCCCATGATCATGGGTTTAATGCAGAGATTCAGACATTGGGGAGAATTAGACACAGACACATTGTGAGATTATTGGGTTTCTGTTCAAACCATGAGACAAATCTCTTGGTCTATGAATACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGTCATCTGCATTGGGACACCAGGTATAAAATTGCTGTGGAGGCTGCAAAGGGTCTTTGCTATCTGCATCATGACTGTTCACCACTTATTGTCCATAGAGATGTGAAATCAAACAATATCCTTCTTGATTCCAATTTTGAAGCCCATGTTGCTGATTTTGGGCTCGCTAAGTTCCTTCAAGATTCCGGAACATCTGAATGCATGTCTGCTATTGCCGGTTCTTATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTTGATGAGAAAAGCGATGTGTACAGCTTCGGGGTGGTTCTTTTAGAACTTGTAACAGGCAGGAAACCTGTTGGAGAATTTGGTGATGGGGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCAAACAAGGAAGGAGTTCTAAAAGTTCTTGATCCTAGACTTCCCTCAGTTCCACTTCATGAGGTGATGCATGTTTTCTATGTTGCCATGCTGTGTGTTGAAGAACAAGCAGTAGAGCGACCAACCATGCGTGAAGTTGTTCAAATTCTCACAGAGCTTCCAAAGCCACCTAGCTCAAAACTTGGAGACTTAACAATCACTGAATCCTCTTTGTCATCATCAAACAGTTTAGAGTCTCCAACCACAGCATCTAACGAACCTAAAGATCATCAACATCCTCCTCAGTCACCACCACCTGATCTTCTTAGCATATGA 3045 0.4703 MRLLPWLSLFLFLLGLVSTSGISEYRALLSFKASSITDDPTKALSSWNSSTSHCSWHGVTCDPRRHVTALNISSLSLSGVLTDDLSSLPFLSHLSLADNKFSGPIPPTLSTLSSLRFLNLSNNIFNGTFPSQLSRLSNLLVLDLYNNNLTGTLPLTVTRMPLLRHLHLGGNFFSGTIPPEYGGWRHLEYLAVSGNELAGVIPPEIGNLTKLRELYIGYYNTYDGGIPPEIGNLSELVRLDAAYCGLSGEIPPEIGKLQNLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNMLAGEVPVSFSELKNLTLLNLFRNKLHGAIPEFIGELPALEVLQLWENNFTGSIPQNLGKNGRFTLVDLSSNKLTGSLPPYMCYGNHLQTLITLGNFLFGPIPDSLGKCESLSRIRMGENFLNGSIPKGLFGLPKLTQVELQDNLLSGQFPEAGSMSANLGQISLSNNKLSGPLPPTIGNFTSMQKLLLDGNEFTGRIPPEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGDIPKEITSMRILNYLNLSRNHLVGTIPGSIASMQSLTAVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSSLKLLLVIGLLVCSIAFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGTMSNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKLGDLTITESSLSSSNSLESPTTASNEPKDHQHPPQSPPPDLLSI* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04393 1014 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04393 1014 SUPERFAMILY RNI-like 70 390 - -
Rops2g04393 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Rops2g04393 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Rops2g04393 1014 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Rops2g04393 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 18 81 - -
Rops2g04393 1014 MobiDBLite consensus disorder prediction 972 1000 - -
Rops2g04393 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Rops2g04393 1014 SMART LRR_typ_2 88 112 IPR003591 -
Rops2g04393 1014 SMART LRR_typ_2 136 160 IPR003591 -
Rops2g04393 1014 SMART LRR_typ_2 569 592 IPR003591 -
Rops2g04393 1014 SMART LRR_typ_2 281 304 IPR003591 -
Rops2g04393 1014 SMART LRR_typ_2 329 353 IPR003591 -
Rops2g04393 1014 SMART LRR_typ_2 473 497 IPR003591 -
Rops2g04393 1014 SUPERFAMILY Protein kinase-like (PK-like) 682 960 IPR011009 -
Rops2g04393 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 379 961 - -
Rops2g04393 1014 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Rops2g04393 1014 SMART serkin_6 689 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04393 1014 MobiDBLite consensus disorder prediction 968 1014 - -
Rops2g04393 1014 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Rops2g04393 1014 Gene3D Transferase(Phosphotransferase) domain 1 767 973 - -
Rops2g04393 1014 Gene3D Ribonuclease Inhibitor 19 82 IPR032675 -
Rops2g04393 1014 Gene3D Ribonuclease Inhibitor 83 353 IPR032675 -
Rops2g04393 1014 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 976 - -
Rops2g04393 1014 Gene3D Ribonuclease Inhibitor 355 618 IPR032675 -
Rops2g04393 1014 SUPERFAMILY L domain-like 354 614 - -
Rops2g04393 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04393 Rops-Chr2 80255560 80259519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04393 22 990 Receptor kinase-like Gene Family AT5G65700 81.949 0.0 1598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops2g04393 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04393 - - gmx:100499646 1734.92