Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04387 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGTTTTGTTCAAAACCTTCACAGACCAGACTTGCACCTGCAGCAACACCATCACGATTCAGAAGACCAACAACAAGAACCGAATCGCGGTTCTGGATCACTGTTTTCTAGCGAAGACGATGACCGAAGCCAAGGTCTGGAGCTAGGTTCGGCGGCGGGACCTGGTGACGTGGTGGGTCGTCGTCCACGTGGCAGGCCACCGGGTTCGAAGAACAAGCAAAAACCGCCGGTGATAATAACAAGGGAAAGCGCAAACACTCTGAGGGCTCATATTCTCGAAGTTGGAAGTGGCGCCGACGTGTTCGATTGCGTCACCACCTACGCTCGCCGCCGTCAGCGTGGGATCTGTGTTCTCAGTGGCAGCGGCACCGTCACCAATGTCAGTCTGCGGCAACCAGCGGCGGCTGGAGCTGTCGTTACTCTCCATGGAAGGTTCGAGATACTGTCCCTTTCAGGGTCTTTCCTTCCACCGCCGGCTCCTCCGGGAGCTACCAGTCTCACGATATACCTCGCCGGAGGGCAGGGACAGGTTGTCGGAGGAAACGTGGTAGGGGAACTCACCGCGGCGGGGCCGGTGATCGTGATTGCTGCTTCTTTCACAAACGTGGCTTATGAGAGGTTGCCGTTGGATGAGGAGGAACAACAGCTCCAGATTCAGCCACCTGCGGGGGGTTCTCAGGGTTCCGGTGGTGGTGGTGTTGGGAACAACCCTTTTCCAGACCCTTCTTCTGGTCTTCCCTTTTTCAATTTGCCACTGAATATGCAGAATGTTCAGTTACCAGTTGATGGTTGGGCGGGAAACTCAGCTTCACGTCCACCTTTTTGA 855 0.5544 MAGLDLGSASRFVQNLHRPDLHLQQHHHDSEDQQQEPNRGSGSLFSSEDDDRSQGLELGSAAGPGDVVGRRPRGRPPGSKNKQKPPVIITRESANTLRAHILEVGSGADVFDCVTTYARRRQRGICVLSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLDEEEQQLQIQPPAGGSQGSGGGGVGNNPFPDPSSGLPFFNLPLNMQNVQLPVDGWAGNSASRPPF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04387 284 ProSiteProfiles PPC domain profile profile. 94 231 IPR005175 -
Rops2g04387 284 MobiDBLite consensus disorder prediction 25 88 - -
Rops2g04387 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 211 IPR005175 -
Rops2g04387 284 Gene3D - 97 231 - -
Rops2g04387 284 FunFam AT-hook motif nuclear-localized protein 97 224 - -
Rops2g04387 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 226 - -
Rops2g04387 284 CDD DUF296 98 181 IPR005175 -
Rops2g04387 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 233 IPR014476 GO:0003680
Rops2g04387 284 MobiDBLite consensus disorder prediction 229 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04387 Rops-Chr2 79924019 79924873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04387 1 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 69.055 2.26e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04387 - - pvu:PHAVU_003G230600g 423.705