Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g04382 | ATGCCAGTTCCACTTGCTCCCTATCCGACACCACCAGCTCCATATACACCACCAACAAATGGTGCACAGAGTCAACTTGTCTGTTCTGGGTGTAGAAATCTTCTAGTCTATCCAGTTGGAGCCACCTCTGTGTGCTGTGCTGTTTGTAATGCAGTCACAGCAGTGCCACCTCCTGGCACAGAAATGGCCCAATTAGTTTGTGGAGGCTGCCATACTTTACTCATGTACATCCGTGGAGCGACAAGTGTGCAATGCTCTTGTTGTCACACGGTCAATCTAGCTTTGGAAGCAAATCAGGTGGCACATGTCAATTGTGGGAATTGCAGGATGCTACTTATGTACCAATATGGAGCAAGATCCGTGAAATGTGCAGTATGCAATTTTGTAACCTCAGTTGGGGCCTCAGCAAGCACCGCTGAACAGAAGTTCAGCACCTAA | 438 | 0.4795 | MPVPLAPYPTPPAPYTPPTNGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASASTAEQKFST* | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g04382 | 145 | SUPERFAMILY | Multiheme cytochromes | 28 | 126 | IPR036280 | - | |
Rops2g04382 | 145 | Pfam | LSD1 zinc finger | 105 | 129 | IPR005735 | - | |
Rops2g04382 | 145 | Pfam | LSD1 zinc finger | 67 | 91 | IPR005735 | - | |
Rops2g04382 | 145 | Pfam | LSD1 zinc finger | 28 | 52 | IPR005735 | - | |
Rops2g04382 | 145 | PANTHER | PROTEIN LSD1 | 16 | 55 | IPR040319 | - | |
Rops2g04382 | 145 | NCBIfam | zinc finger domain, LSD1 subclass | 64 | 93 | IPR005735 | - | |
Rops2g04382 | 145 | NCBIfam | zinc finger domain, LSD1 subclass | 102 | 132 | IPR005735 | - | |
Rops2g04382 | 145 | NCBIfam | zinc finger domain, LSD1 subclass | 25 | 55 | IPR005735 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g04382 | Rops-Chr2 | 79855527 | 79857806 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-LSD | Rops2g04382 | zf-LSD1 | 1.4e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g04382 | - | - | qsu:112000975 | 269.24 |