Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04367 ATGGACTATAATGTTATTGCATTCTGCGATGAGAATGAAGCCTTGTCAGCAATCTCAAGTAGACCCGAAGGCTTTCACATTGCCATAGTGGAGGTGAGTTCAAGCAGTGGCCATGGAGGTTTCAAATTTCTTCAGAATGCCAAAGACTTGCCAACCATTATGACTTCAAACAATCATTGCCTGAGCACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCCTCAGCAAACCACTCTCTGAAGACAAGCTCAGAAATATCTGGCAGCACGTGGTTCACAAGGCATTCAATGCTGGGGCGAGTGTCCTGTCTGAATCACTGAAACCTGTCAAAGAATCTGTAGCGTCCATGTTGCAGCTCCAAACAGACAATGAACAACATGAAAGTAGAGTCTCAATTGACAATGACCATGAGCAGTATCCAGCTCCTTCCACCCCACAATTGAAACAGGGGTCAAGATTGCTGGATGATGGGGATTGCCAAGAGCAGACTAATTGCTCAACAGAAAAAGAAAGTGGGGAACATGATGGTGAATCTAAATCTGTCGAAACTACATGTGAAAATTTGAATGCTGAAAGTACTCCTAAGAAAAGGAAATCTGAAATGACTATTAAGGAGGAAGAGCATTTTGCCGATGCTTCTAAGGGTGAAAGTGCTGTTTCTCCAAATCTGCAAAATAGAGAGGTTCTCAGCAACACTGAAAGTAATACAACATCTCAAAATAAAGTGGGAGTCCATAGAGATAAATGTGAGATGAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCACAAAAAATTTGTGAAGGCAGTGGAACAACTAGGCATTGATCAAGCCATTCCTTCTCGAATATTGGATCTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAATATAGAATGCATAAGAGACAAATCTTGCCCAAGGATGAAGATAGGAAATGGCTAAATCGAAGAGATCCAATGCAAAGGAGCTATTGTCTTCAAAGACCAATTATGGCCTTTCCTCCATATCATTCTAACCACACCCTTCCTCTGCCTTCTGTATATCCTATGTGGGGACAATCTGGCAGTCAGACGACCGGCATGCAGATTTGGGGCCCTCCTGGTTATCCCATGTGGCAGCCTACAGAAAGTTGGCACTGGAAACCATTTCCAGGGATGTATGCAGATGCATGGGGCTGCCCAGTGTTACCACCACCTCTTCAAGCTCCTTGCTTTCCCCACTCTCAGAACATGCCTGCCTTGCACAATGCTAATGCAGTGGATTACACATTTAGCATGCCATCTGGTTCCTTCGAACATTATCCGGCAGAGGAAGTTGTTGACAAAGTTGTGAAGGAGGCAATAAGTAAGCCATGGCTACCCTTACCCTTAGGCCTCAAACCACCTTCCACAGATAGTGTATTGGCTGAGCTTTCCAGGCAAGGCATCTCCAGCATCCCTCCTGGCAGCTGTTCTAATCCTAGTTGA 1506 0.4475 MDYNVIAFCDENEALSAISSRPEGFHIAIVEVSSSSGHGGFKFLQNAKDLPTIMTSNNHCLSTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGASVLSESLKPVKESVASMLQLQTDNEQHESRVSIDNDHEQYPAPSTPQLKQGSRLLDDGDCQEQTNCSTEKESGEHDGESKSVETTCENLNAESTPKKRKSEMTIKEEEHFADASKGESAVSPNLQNREVLSNTESNTTSQNKVGVHRDKCEMKANRKKMKVDWTPELHKKFVKAVEQLGIDQAIPSRILDLMKVEGLTRHNVASHLQKYRMHKRQILPKDEDRKWLNRRDPMQRSYCLQRPIMAFPPYHSNHTLPLPSVYPMWGQSGSQTTGMQIWGPPGYPMWQPTESWHWKPFPGMYADAWGCPVLPPPLQAPCFPHSQNMPALHNANAVDYTFSMPSGSFEHYPAEEVVDKVVKEAISKPWLPLPLGLKPPSTDSVLAELSRQGISSIPPGSCSNPS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04367 501 Gene3D - 255 317 - -
Rops2g04367 501 ProSiteProfiles Response regulatory domain profile. 1 93 IPR001789 GO:0000160
Rops2g04367 501 SUPERFAMILY Homeodomain-like 258 316 IPR009057 -
Rops2g04367 501 Pfam Myb-like DNA-binding domain 262 311 IPR001005 -
Rops2g04367 501 MobiDBLite consensus disorder prediction 139 168 - -
Rops2g04367 501 FunFam Two-component response regulator 255 318 - -
Rops2g04367 501 MobiDBLite consensus disorder prediction 121 204 - -
Rops2g04367 501 SUPERFAMILY CheY-like 2 95 IPR011006 -
Rops2g04367 501 MobiDBLite consensus disorder prediction 169 183 - -
Rops2g04367 501 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 495 IPR044825 GO:0003700|GO:0045893
Rops2g04367 501 FunFam Two-component response regulator-like APRR2 1 104 - -
Rops2g04367 501 Gene3D - 1 102 - -
Rops2g04367 501 NCBIfam myb-like DNA-binding domain, SHAQKYF class 259 314 IPR006447 GO:0003677
Rops2g04367 501 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 315 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04367 Rops-Chr2 79557209 79563813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04367 1 497 Response Regulator Gene Family AT4G18020 51.445 3.87e-138 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Rops2g04367 Myb_DNA-binding 2.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04367 - - gmx:100777535 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01955 1 39659216 39669586 Rops2g04367 2 79557209 79563813 PCT