Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04337 ATGCAATATGAGAACCCATTCAAGGTTCCATCGGAGAAACTTGTGTTCACAATCTTCAATTTTCCTGAAGGAAATCTAGATACTTGTGTCATGAAAGGACACAAAAGGGATGCAACAACGACCATCATGGTGCACTGTGAACTTCATGCCACTGAGCTCTGTGTTCTGTTGAGTCTTGAGGGGCTTAAGTCTCTACTTTTCAATGTTCTAGGTGGCTTTGGTTTTGACATGGAGGAGCGGTATGAGCCATTGAAGGACCTTGGTTCTGGGAATTTTGGAGTTGCAAGATTGGCTAAAGACAAGAAAACTGGAGAGCTTGTTGCAGTCAAATACATAGAGAGGGGGAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAACCACCGATCTTTAACGCATCCAAATATTATCAGGTTCAAAGAGGTCTTGCTGACCCCTACTCATTTAGCTATTGTCTTGGAGTATGCTTCTGGTGGTGAACTCTTTGAGAGAATATGCACCGCTGGTCGATTTAGTGAAGATGAGGCAAGATATTTCTTCCAGCAGCTTATATCTGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCACAGAGACCTAAAATTGGAAAACACTCTCTTGGACGGGAATCCATCCCCTCGGCTTAAAATTTGTGACTTCGGTTACTCCAAGTCTGCTTTACTGCACTCTCAACCTAAGTCAACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTCTGTCACGAAAGGAGTATGACGGAAAGATTGCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACAATTGGGAGAATAATAGGTGTTCAGTACTCCATACCCGACTATGTACGTGTTTCTGCAGAGTGTAGGAATCTTCTTTCTCGTATCTTTGTTGCCGATCCTGGCAAGAGGATCACCATCCCAGAGATAAAACAGAATCCTTGGTTTTTCAAGAACTTGCCCAAAGAGATCATTGAAGTTGAAAGAAAAGGAAAAGGTTACGTGGAAACAAAGAAAGACCAACCAAGTCAGAGTGTAGAAGAAATCATGAGGATCATACAAGAGGCAAGGATACCAGGACAAGGGTCCAAAGCTGGTGAAGTTGGGCAAGCTGGTACTGGATCATTGGATGTTGATGATGATGAGGAAATTGATGTTAGTGGTGACTATGAACCTGTGTGA 1245 0.4241 MQYENPFKVPSEKLVFTIFNFPEGNLDTCVMKGHKRDATTTIMVHCELHATELCVLLSLEGLKSLLFNVLGGFGFDMEERYEPLKDLGSGNFGVARLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLTHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICTAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSAECRNLLSRIFVADPGKRITIPEIKQNPWFFKNLPKEIIEVERKGKGYVETKKDQPSQSVEEIMRIIQEARIPGQGSKAGEVGQAGTGSLDVDDDEEIDVSGDYEPV* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04337 414 FunFam Serine/threonine-protein kinase SRK2E 77 156 - -
Rops2g04337 414 SUPERFAMILY Protein kinase-like (PK-like) 79 344 IPR011009 -
Rops2g04337 414 Pfam Protein kinase domain 81 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04337 414 FunFam Serine/threonine-protein kinase SRK2E 157 345 - -
Rops2g04337 414 Gene3D Transferase(Phosphotransferase) domain 1 157 344 - -
Rops2g04337 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Rops2g04337 414 SMART serkin_6 81 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04337 414 MobiDBLite consensus disorder prediction 379 414 - -
Rops2g04337 414 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Rops2g04337 414 PANTHER SERINE/THREONINE KINASE 79 357 - -
Rops2g04337 414 MobiDBLite consensus disorder prediction 397 414 - -
Rops2g04337 414 CDD STKc_SnRK2 80 336 - -
Rops2g04337 414 Gene3D Phosphorylase Kinase; domain 1 74 156 - -
Rops2g04337 414 ProSiteProfiles Protein kinase domain profile. 81 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04337 Rops-Chr2 79084324 79091539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04337 80 365 CBL-interacting serine-threonine protein kinases AT4G24400 42.034 8.32e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops2g04337 Pkinase 3.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04337 K14498 - gmx:100817713 641.728