Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04322 ATGGCTATGGGAATCCAAGGGGAGCTTGAGGCTTTGGCGACTATGGAAGAACGGTCAATGATGGCAGTGTTGCAACCGTGTCTGGAAGGCTATGAAGGAATGAAGGTGGCTGTGGTGCATGGTGCAAAATACCACAATAATGACAATGGAGCAATAGTGGTGGCAACAGACTATGGTGAGGGAGACAGAACAGACTTCATCTTGAGCCCACGTGCTTTTACAAAATTGGGAAGCAATGCAGATGCATCTGAAAAGCTGAAAAAATACGGTGTTGTGGATGTTGAATACAAAAGGGTCCCCTGTACTTTCAAGGGTGATAACATTGTGTTTCAGATCAATGAACACAACAAAAACCCTGGCTACTTTGCCATCGTGGTTCTCTATGTAGGTGGAACGTACGAAGTCAATGCTGTTGAGATGTGGCAGAGAGATCACCACCAATGGGAGCCACTGCGTAGGGCCTATGGGGCAGTATTTGACTTTGCTAACCCACCAAGAGGTGAAATCCGGTTGAGGTTCCAAGTGAGTAGCAATGGAAGGCTTAAGTGGGTGGATATGGGATCCAGGTTTGCAATCCCTGCAGGTTGGAAGGCTGGAGCTACTTATTTCACCAAGATTCAACCTTACTAG 630 0.4683 MAMGIQGELEALATMEERSMMAVLQPCLEGYEGMKVAVVHGAKYHNNDNGAIVVATDYGEGDRTDFILSPRAFTKLGSNADASEKLKKYGVVDVEYKRVPCTFKGDNIVFQINEHNKNPGYFAIVVLYVGGTYEVNAVEMWQRDHHQWEPLRRAYGAVFDFANPPRGEIRLRFQVSSNGRLKWVDMGSRFAIPAGWKAGATYFTKIQPY* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04322 209 Gene3D - 27 102 IPR036908 -
Rops2g04322 209 PRINTS Expansin/Lol pI family signature 148 162 IPR007118 GO:0005576
Rops2g04322 209 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Rops2g04322 209 PRINTS Expansin/Lol pI family signature 89 105 IPR007118 GO:0005576
Rops2g04322 209 PANTHER EXPANSIN-B3 47 207 - -
Rops2g04322 209 SUPERFAMILY PHL pollen allergen 108 203 IPR036749 -
Rops2g04322 209 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 106 IPR007112 -
Rops2g04322 209 Pfam Expansin C-terminal domain 108 180 IPR007117 -
Rops2g04322 209 SUPERFAMILY Barwin-like endoglucanases 43 105 IPR036908 -
Rops2g04322 209 Gene3D - 103 209 IPR036749 -
Rops2g04322 209 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 120 204 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04322 Rops-Chr2 78781209 78782286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04322 45 206 Expansin Gene Family AT4G17030 49.383 1.63e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04322 - - psat:127074244 273.092