Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04319 ATGCAATTTGTGTCTTTGAGGCTGAGCAAGAGGCTCTCTAATTCGAAGCCTCTTTGGCGAATCTCATCCAACCTTGTCGCTTACACATCAACCACCGCTCCTTCCTCTCTGCCATCGTCACCTCCGATCTCCACCACCGACGGCACTGCCTTCACTCACAACAACTTCCTCATTTCTATTTTGATTCTCCTTTTCTTCAAGATCCATGGGAACCAACTTGCAGAGATGCCATTTATTGGGACTCGCTATATGTATAGGCGACAAGGAATGTGTCGTCGGCTTCTAGATGCCATTGAATGGTTCACTGAATTTAGAACTGATGGATGCATTTTGCTGCTTCAAACTTGCTTGGTTCACTTTAATGTCAGAAGAGATGTGAAAGACATGCAAAACCAGCCAATTCTTAGGGCAGTCATTAAGTGTCTATTGGACAAATCGAACTTTCATCTAGTGTTTTCCGAGTCAATGAAGAATGTAGAAATTAATGAAAGCTTTCTAGAAAGTTTTTCTAATGGATTGCAGTTGTCTTTATTGGAAAAAATTGCCAACAGTCTTGCTTTATCTGATTCTGAAAATCCCAATGCCAGGTTATGTGGTAATTCCCACTTCAATTATGACAGCCGGGAAAGAGATTCTAATAGCACACACCAACGACAAACAGCAGCCGTAAGAACCTTCCTATTCCCATTTCACAAATTATCTTCTGTTTTACATATTACTGTCGAGTCAAAGATGGATATGGAAGTCACCAGCACTTTACAATCCGCTGAAATTATTGATAGCCAAAGCCCATCCATGAAGGCAATTGAGCAGTTTGTTTCAGGATCAACGAAGAAGAAATCAGCTCTGAGGTTGGATGAGGATGAGTCTATTGCAGAACTTGCAATGCATGCCCTGCATCATCCAAGCCCTATTTCAGTTCTTGATTTCTCAGTATACAAAGATGATTTGCCATCTCCTGTAAAGCTTATATTCAATGCTCCCAAAGACAGTGATGCTCAAGAATCTGAAGAAAACAAGAATATAGATCAGTGGAACCCCGCAGATAGCCTTTCAGTTAACAGCACAGGATCCGAAGAGATCAACCGTAAGAAGTTGCAAAGTATAGATCACCTTGTTCAGAAGCTTGACGGCTAA 1137 0.4142 MQFVSLRLSKRLSNSKPLWRISSNLVAYTSTTAPSSLPSSPPISTTDGTAFTHNNFLISILILLFFKIHGNQLAEMPFIGTRYMYRRQGMCRRLLDAIEWFTEFRTDGCILLLQTCLVHFNVRRDVKDMQNQPILRAVIKCLLDKSNFHLVFSESMKNVEINESFLESFSNGLQLSLLEKIANSLALSDSENPNARLCGNSHFNYDSRERDSNSTHQRQTAAVRTFLFPFHKLSSVLHITVESKMDMEVTSTLQSAEIIDSQSPSMKAIEQFVSGSTKKKSALRLDEDESIAELAMHALHHPSPISVLDFSVYKDDLPSPVKLIFNAPKDSDAQESEENKNIDQWNPADSLSVNSTGSEEINRKKLQSIDHLVQKLDG* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04319 378 MobiDBLite consensus disorder prediction 340 362 - -
Rops2g04319 378 PANTHER LONGIFOLIA PROTEIN 216 376 IPR033334 GO:0051513
Rops2g04319 378 MobiDBLite consensus disorder prediction 329 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04319 Rops-Chr2 78751284 78756325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04319 254 376 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.400 6.03e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04319 - - gmx:100787391 187.193