Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04299 ATGCATATAGAGGAATTGAAGGGAGGTGAGGTGGGAGAAGGTGGAGAGGAAGGGAGACCATCGAGCTTTGTTGGTTCCGATGCGAAAAAGGTTCTGGTCGGAGCAGGGGCTCGTGCGCTTTTCTATCCCACCCTGTTTTACAATGTTGTTAGGAATAAGATTCAGGCTGATTTTCGATGGTGGGATAAGGTTGATAAGTTCATATTGTTAGGTGCTGTACCGTTTCCTATTGACGTGCCCCGCTTGAAGGAGCTTGGTGTCCACGGGGTCATCACATTGAATGAATCATATGAGACTTTGGTTCCAACCACCTTGTATTATGCTCATGGAATTGACCATCTGGTGATTCCTACTAGAGATTACTGTTTCGCTCCATCATTGCATGACATACGCCGTGCTGTGGACTTCATACATGAAAATGCATTATCTGGACGCACAACATATGTCCACTGCAAAGCTGGACGGGGTCGCAGCACAACTATTGTTATTTGTTATCTGGTGCACCACAAACTGATGACACCTGATGCTGCATATGAATATATCAAATCAATTAGGCCAAGGGTGCTCTTAGCCTCCTCTCAATGGCATGCTGTCCAGGAATACTACTGCCACCTTATGATGAGGAGGGCTGTTGGATGTGCTCCTAAAGCCGATCTATTAGTAAAGGCTTCTGGGGTTTCAGTAGCTTCACGAGATCTTGTAACGTTTGATGACAGTTCTGTTGTTGTGGTAACAGAGCAAGATCTTGAGGGATACGACCCAAGTTGTCAATCACGAACGATGGCAAATGAAATATGGGCAGATTTAAGCGTTGTCTACCGTGTGCGAGTTGCTGGACAGGCGGCATTGGCAAGAATTTCATGCCTTTGGCTGCGATATGGTACTGACCAGAAGATTTCTGCGGAGAAACTGAGCAGGGAAAGCAGTTGCTCAATCGGGACTAATCACTTGGGAGGAGTTAGTGTTGATATCCACGTGTACTGA 984 0.4624 MHIEELKGGEVGEGGEEGRPSSFVGSDAKKVLVGAGARALFYPTLFYNVVRNKIQADFRWWDKVDKFILLGAVPFPIDVPRLKELGVHGVITLNESYETLVPTTLYYAHGIDHLVIPTRDYCFAPSLHDIRRAVDFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHHKLMTPDAAYEYIKSIRPRVLLASSQWHAVQEYYCHLMMRRAVGCAPKADLLVKASGVSVASRDLVTFDDSSVVVVTEQDLEGYDPSCQSRTMANEIWADLSVVYRVRVAGQAALARISCLWLRYGTDQKISAEKLSRESSCSIGTNHLGGVSVDIHVY* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04299 327 FunFam Dual specificity phosphatase domain protein 60 207 - -
Rops2g04299 327 MobiDBLite consensus disorder prediction 1 22 - -
Rops2g04299 327 CDD PTPMT1 60 202 IPR044596 GO:0004721
Rops2g04299 327 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Rops2g04299 327 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
Rops2g04299 327 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Rops2g04299 327 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 206 IPR029021 -
Rops2g04299 327 Gene3D Protein tyrosine phosphatase superfamily 60 211 IPR029021 -
Rops2g04299 327 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Rops2g04299 327 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 296 - -
Rops2g04299 327 Pfam Dual specificity phosphatase, catalytic domain 82 202 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04299 Rops-Chr2 78403531 78408183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04299 29 327 Protein tyrosine phosphatase (PTP) family AT2G35680 62.662 4.40e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04299 - - gmx:100790413 544.273