Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04291 ATGGACGTGGAAGAAACTGTCCTTATGGATAGTGAACTTCAACCAACCACCTCCTTGTCTTTCACCATTATTGCATCCTCCTCCTCCTCCTCCTCTTCCTCCTCCACAGAAGAACCCACTAACAACGAGAAGAAGAAGAAGGAGGAAAAAGTGGAAAAGAGAAACATTAATAATGGGAAGCACCCAACTTACAGAGGAGTACGCATGCGTCAATGGGGTAAATGGGTATCAGAAATCAGAGAGCCTAGGAAGAAATCAAGAATTTGGCTTGGCACTTTTCCAACACCAGACATGGCGGCTCGAGCCCATGACGTGGCGGCTCTCACAATCAAAGGCTCCTCAGCTTACCTTAATTTCCCCGAACTAGCTGCCGAGCTGCCACGCCCCGCCAGCACTTCACCTAAGGACATCCAAGCCGCTGCCGCCAAGGCAGCCGCCACAGATTACAGCCACCGAAGCCATGAAGCTGAATTGGAAGCTGAGTCTGAGCTGAGCCAAGCCGTTTCCTCCTCCTCCTTTTCCTCAAGCCACACTCGAGAGTCATCGTTGAAGGGTGAGGATGACACATTCTTGAACCTTCCTGATCTCTCACTCAACTTGAATCATAGTGCTGATGGGTTTTATTACTCTTCGGCTTGGCTTGTAGCTGGAGCCGAACATATGGAGTCAGGTTTCCAGCTGGATGAGCCTTTTCTATGGGAGTCATATTAA 711 0.4951 MDVEETVLMDSELQPTTSLSFTIIASSSSSSSSSSTEEPTNNEKKKKEEKVEKRNINNGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAELPRPASTSPKDIQAAAAKAAATDYSHRSHEAELEAESELSQAVSSSSFSSSHTRESSLKGEDDTFLNLPDLSLNLNHSADGFYYSSAWLVAGAEHMESGFQLDEPFLWESY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04291 236 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Rops2g04291 236 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Rops2g04291 236 MobiDBLite consensus disorder prediction 24 64 - -
Rops2g04291 236 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Rops2g04291 236 MobiDBLite consensus disorder prediction 39 59 - -
Rops2g04291 236 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 35 199 - -
Rops2g04291 236 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Rops2g04291 236 MobiDBLite consensus disorder prediction 143 186 - -
Rops2g04291 236 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Rops2g04291 236 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Rops2g04291 236 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Rops2g04291 236 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Rops2g04291 236 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Rops2g04291 236 MobiDBLite consensus disorder prediction 24 38 - -
Rops2g04291 236 MobiDBLite consensus disorder prediction 163 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04291 Rops-Chr2 78180446 78181606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04291 52 232 AP2-EREBP Transcription Factor Family AT2G44940 52.133 7.63e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Rops2g04291 AP2 9.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04291 - - gmx:100101914 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02026 1 40877622 40878447 Rops2g04291 2 78180446 78181606 PCT