Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04285 ATGGGTGCCTACAAGTATGTTTCGGAGCTATGGCGCAAGAAGCAGTCTGATGTCATGAGATTCCTGCAGCGTGTGAGGTGCTGGGAGTATCGTCAGCAACCTTCTATTGTCCGTGTCACAAGGCCTACTCGCCCAGACAAGGCTCGTCGTTTGGGTTATAAGGCCAAGCAGGGTTATGTGGTTTACCGTGTTCGTGTTCGAAGGGGTGGCCGCAAGAGACCAGTTCCCAAAGGTATTGTTTATGGGAAGCCAACAAACCAGGGTGTTACTCAATTGAAATTTCAGCGTAGCAAGAGGTCAGTTGCTGAGGAGCGAGCTGGACGGAAGCTGGGTGGCCTCAGGGTTCTCAATTCTTACTGGGTGAACGAGGACTCAACTTACAAATATTATGAGATCATTATGGTGGATGTTGCCCACAGTGCTATAAGAAATGATCCAAGGATCAATTGGCTCTGCAATCCAGTCCACAAACACAGGGAACTGCGTGGCCTCACTTCTGCTGGGAAAAGCAACAGGGGTTTGCGGGGCAGAGGACATCTGTACCACAAAAATCGTCCATCCCGCAGGGCAACCTGGAAGAGAAACAACACCCTTTCTCTTCGTCGCTACCGCTGA 615 0.5057 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIIMVDVAHSAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKNRPSRRATWKRNNTLSLRRYR* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04285 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Rops2g04285 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Rops2g04285 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Rops2g04285 204 FunFam Ribosomal protein L15 1 204 - -
Rops2g04285 204 MobiDBLite consensus disorder prediction 163 188 - -
Rops2g04285 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
Rops2g04285 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Rops2g04285 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04285 Rops-Chr2 78091293 78093208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04285 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.667 4.50e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04285 K02877 - gmx:100306052 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02029 1 40930221 40933285 Rops2g04285 2 78091293 78093208 PCT