Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04277 ATGGTGGGGATGGTGAATGTTGGAATGATGGAAGATGTAGCAATTATAGGAGGGTTGATAGGGGTGCAATTTGTTTATGCAGGGAATGCTGTGTTGATGAATTATCTTATGTCTGTGGGTCTTAGCTCTCTTACCATTGTTACTTTCATTTCCTTTGCTTCATTCCTTGTTCTCATCCCCCTTGCCTTTTATTATGAGAGGAGTAAGTGGCCCAAGAAATTGAGTTTGAAGTTGCTTATACAGATTCTGACCCTTTCGTTTGGAGGTACAACTTTGTTCCAGACTTTATTACTTAAAGGAATGCATCTAACCTCGGCAACAATGGCAACTGCCATGCCAAACCTTGCCCCTGGTCTCATCTTCATCATCGCGTGGATTTTTCGGTTGGAAAAAATCAACTTAAGCTGCACTTATAGTAGAGTAAAAATCATGGGCACATTGCTTTGTGTCTCAGGGGCTCTCACAATGAGCATAGTGCAGAGCATTTCTACTCCTGTGACCACAAAAGAGGGAACACTCGAATTATCATCACCACCACTTTTAATGTTTGACAGAGATAAGATAATCGGTTGCCTCTATCTCTTGGCCGCGGTCCTCTTATTGTCAAGCATTATCGTCCTGCAGGCTTTTACTCTAGCAGATTTTCCTGCACCCATGTCCTTGTCGGCAATAACATCCTTTTTGGGGGCTTTCATTAGTGCAGCAGCTCAATTAGTTGAAGATGGTGAATTCAAAACTGGTTGGCCACTAATTACTACTAGAGACATGATTGGCTATACTTTTCTGGCAGGTGCAGTGAGTGGAATATCCTTAAGCTTCTGTGGTTGGGCAATTGAGAAGAGAGGGCCAGTCTTGGTCTCCATGTTCAGCCCCATCGCCACTGTCAGCTCTGTCATTTTCTCAGTTGTTACCATAGGGAACACCATTAATATTGGAAGCTTTGCGGGTATGTTCCTCATGTTCACTGGACTCTACTTTGTGCTTTGGGCCAAAGGAAAAGAAGGCTACATAGAGAGTGAGTTTGATGAAGAGAAGCCTCTCTTAAGTTGA 1050 0.4314 MVGMVNVGMMEDVAIIGGLIGVQFVYAGNAVLMNYLMSVGLSSLTIVTFISFASFLVLIPLAFYYERSKWPKKLSLKLLIQILTLSFGGTTLFQTLLLKGMHLTSATMATAMPNLAPGLIFIIAWIFRLEKINLSCTYSRVKIMGTLLCVSGALTMSIVQSISTPVTTKEGTLELSSPPLLMFDRDKIIGCLYLLAAVLLLSSIIVLQAFTLADFPAPMSLSAITSFLGAFISAAAQLVEDGEFKTGWPLITTRDMIGYTFLAGAVSGISLSFCGWAIEKRGPVLVSMFSPIATVSSVIFSVVTIGNTINIGSFAGMFLMFTGLYFVLWAKGKEGYIESEFDEEKPLLS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04277 349 PANTHER WAT1-RELATED PROTEIN 18 335 IPR030184 GO:0016020|GO:0022857
Rops2g04277 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 157 - -
Rops2g04277 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 332 - -
Rops2g04277 349 Pfam EamA-like transporter family 19 156 IPR000620 GO:0016020
Rops2g04277 349 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04277 Rops-Chr2 77988195 77993942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04277 9 345 Nodulin-like Gene Family AT5G47470 56.213 8.09e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04277 - - gmx:100809182 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g02048 1 41190065 41194037 Rops2g04277 2 77988195 77993942 PCT