Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04267 ATGCTCTTGGTTTTCTTCACTTGCATATTGCACGCAGCAACCGTGACATGCACAACCTACTACTACGACACTACCCCCAAAATAGTCTCTTCCACAAACTCCTCCAAGCATAATCTTCATTGGGTGGGACCCATTGGTCACCGAGTAATTACCGTTGACATCAACGGCGGTGGCCATTTCCGGTCAGTCCAAGCCGCCGTCAATGCAATCCCGGAGAACAATAGAATGAACGTCCTAATTCAAATTAGCGCCGGATACTACGTAGAGAAGGTAGTGGTGCCCGTGACGAAGCCGTACATAACGTTTCATGGAGCGGGAAGGGATGTGACAGTGATAGAATGGCATGACCGTGCCAGTGACCCTGGTCCCAATGGACAACAACTTCGTACTTACAGAACTGCATCTGTTACTGTTTTTGCTAACTATTTCTCTGCTAGAAACATAAGCTTCAAGAACACAGCGCCAGCTCCGATGCCGGGAATGCAGGGATGGCAAGCGGCGGCGTTTCGCATTTCAGGGGACAAAGCTTACTTCTCTGGTTGTGGGTTCTATGGTGCACAAGACACTCTTTGCGACGACGCTGGTCGCCATTATTTTAAAGAATGTTACATCGAAGGCTCCATAGATTTCATTTTTGGGAATGGCAGGTCCTTGTACAAGGATTGCGACTTACACTCCATTGCAACGAGGTTCGGGTCTATAGCAGCCCAAGATAGGAAATACCCTTACGAGAAGACGGGCTTCGCATTCGTACGCTGCAAGGTAACGGGAACAGGCCCAATTTATGTGGGCCGTGCAATGGGCCGGTACTCTAGGATTGTCTATGCCTATACCTACTTCGATGACATCGTTGCACATGGCGGTTGGGATGATTGGAACAATGCGAACGACAATAACAAGACTGTGTTCTTTGGAGTGTACAAGTGCTGGGGCCCAGGAGCAACAGCGATACGTGGGGGTTCATTGGCCCAAGACCTAGATTTCGAATCAGCCCATCCATTCCTCGTCAAGAGTTTTGTCAACGGGAGACACTGGATTGCACCCTCTGATGCTTAG 1056 0.4934 MLLVFFTCILHAATVTCTTYYYDTTPKIVSSTNSSKHNLHWVGPIGHRVITVDINGGGHFRSVQAAVNAIPENNRMNVLIQISAGYYVEKVVVPVTKPYITFHGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSLYKDCDLHSIATRFGSIAAQDRKYPYEKTGFAFVRCKVTGTGPIYVGRAMGRYSRIVYAYTYFDDIVAHGGWDDWNNANDNNKTVFFGVYKCWGPGATAIRGGSLAQDLDFESAHPFLVKSFVNGRHWIAPSDA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04267 351 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 347 - -
Rops2g04267 351 Gene3D - 46 350 IPR012334 -
Rops2g04267 351 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Rops2g04267 351 SUPERFAMILY Pectin lyase-like 47 348 IPR011050 -
Rops2g04267 351 FunFam Pectinesterase 45 348 - -
Rops2g04267 351 Pfam Pectinesterase 50 342 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04267 Rops-Chr2 77803262 77808688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04267 4 351 Carbohydrate Esterase AT5G47500 71.023 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04267 - - gmx:100796327 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04267 2 77803262 77808688 Rops2g04267 2 77803262 77808688 ECH
Rops1g02051 1 41279609 41283827 Rops2g04267 2 77803262 77808688 PCT