Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04263 ATGGCTTATCCCCTGTTTTTGCTCTTGCTTACGATACTCTGTATTTCACATCCCTCGTCGCAAATGATATTATTACCTCTTACACACTCTCTTTCCCATACTCAATTCAACAGTACTCACCACCTTCTCAAATCCACCTCCACCCGCTCCGCAGCACGCTTTAGCCACCAACGACAACTCTCTCTCCCACTCTCACCAGGAAGCGACTACACTCTCTCCTTCAACTTTGGCTCCAATTCCCAGCCCATAACACTCTACATGGACACCGGAAGCGACGTCGTTTGGTTCCCATGCACTCCTTTCCAGTGCATACTCTGCGAAGGCGAAGGCCCTTCTTCCCCCGCCAACATCACCCGAAACGTCGCCGTTTCATGCAAATCCCCTGCATGTTCCGCAGCACACAACTCAATCTCTTCCTCTGATCTCTGCGCAATGGCTCGTTGCCCCCTCGAATCAATCGAAACCTCAGATTGCGCTTCTTTCTCATGTCCACCTTTTTACTACGCTTATGGCGACGGAAGTTTAATCGGTGGCCTCTATCGTGATACACTCTCTTTGTCTTCTTCTCTGCTTCTAGAAAACTTCACCTTCGCCTGTGCCCACACTACCCTCGCTGAACCCACCGGTGTCGCTGGTTTCGGTCGTGGATTGCTTTCTTTCCCTGCTCAGTTAGCTACACTCGCACCACACCTTGGAAACCGCTTCTCTTATTGCTTGCTTTCTCACTCTTTCCAATCCCGACGAGTTCGCCGACCGAGTCCACTCATCCTCGGACGCTACGAAGAAGAGAGGGTTGGTGGTGGTGAAGTGGATAAGTTTGTGTACACGCCCATGCTTGAAAACCCTAAGCATCCCTATTTCTACTGCGTAGGCCTCGTTGGAATCTCCGTCGGAAAAACGACTATTCCTGCGCCGGAGATGCTGAGGAGGGTGAACAGGAGAGGTGACGGCGGCGTGGTTGTGGATTCTGGCACCACGTTCACGATGTTGCCGGCTGGTTTTTATGACTCGGTGGTAGCTGAGTTTGACCGCCGAGTCGGACGAGTCCACGAGCGCGCACGTGGGGTTGAGGAGAAAACGGGACTCCGGCCGTGTTATTATTTAGACGCGGTAGCGAAAGTGCCGTCCGTGACGCTGCGTTTCGCTGGGGGGAATTCCAGTGTGGTGCTGCCCAGGAAGAACTATTTCTATGAGTTTTTAGACAGTGATGATAAAAGGAGAGTGGGATGTTTGATGGTGATGAACGGTGGAGATGAGGGTGAATTCAGCGGTGGGCCCGGGGCCATCCTTGGAAATTATCAACAGCAGGGATTTGAAGTTGTGTATGACTTAGAAAAGAATCGCATCGGTTTTGCCAGGAGGCAGTGTGCGTCGCTTTGGGATAGACTCAACCACCACAAAAACTAG 1407 0.5174 MAYPLFLLLLTILCISHPSSQMILLPLTHSLSHTQFNSTHHLLKSTSTRSAARFSHQRQLSLPLSPGSDYTLSFNFGSNSQPITLYMDTGSDVVWFPCTPFQCILCEGEGPSSPANITRNVAVSCKSPACSAAHNSISSSDLCAMARCPLESIETSDCASFSCPPFYYAYGDGSLIGGLYRDTLSLSSSLLLENFTFACAHTTLAEPTGVAGFGRGLLSFPAQLATLAPHLGNRFSYCLLSHSFQSRRVRRPSPLILGRYEEERVGGGEVDKFVYTPMLENPKHPYFYCVGLVGISVGKTTIPAPEMLRRVNRRGDGGVVVDSGTTFTMLPAGFYDSVVAEFDRRVGRVHERARGVEEKTGLRPCYYLDAVAKVPSVTLRFAGGNSSVVLPRKNYFYEFLDSDDKRRVGCLMVMNGGDEGEFSGGPGAILGNYQQQGFEVVYDLEKNRIGFARRQCASLWDRLNHHKN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04263 468 PANTHER ASPARTYL PROTEASES 6 450 IPR001461 GO:0004190|GO:0006508
Rops2g04263 468 Pfam Xylanase inhibitor C-terminal 288 452 IPR032799 -
Rops2g04263 468 Gene3D Acid Proteases 57 258 IPR021109 -
Rops2g04263 468 Gene3D Acid Proteases 267 461 IPR021109 -
Rops2g04263 468 FunFam Probable aspartyl protease At4g16563 60 257 - -
Rops2g04263 468 ProSiteProfiles Peptidase family A1 domain profile. 70 452 IPR033121 -
Rops2g04263 468 SUPERFAMILY Acid proteases 65 461 IPR021109 -
Rops2g04263 468 Pfam Xylanase inhibitor N-terminal 70 258 IPR032861 -
Rops2g04263 468 CDD pepsin_A_like_plant 70 456 IPR034161 -
Rops2g04263 468 FunFam aspartic proteinase nepenthesin-1 263 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04263 Rops-Chr2 77710191 77711961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04263 44 459 Miscellaneous Gene Families AT1G77480 26.049 6.15e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04263 - - gmx:100805699 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04263 2 77710191 77711961 Rops2g04263 2 77710191 77711961 ECH
Rops2g04263 2 77710191 77711961 Rops10g00860 10 19579753 19582259 ECH
Rops1g02055 1 41365202 41366895 Rops2g04263 2 77710191 77711961 PCT