LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g04245	ATGTCTCTTCTACCACAGACTCTCCTTCTCTTCCTCTTCTTCTCGTTTCCCCACAACAACAACAACATAAGGACACAAAACAAAAACTCTAGAGAGAGAGAGAGAGAGAAACATTGCATATTATTACATGTGATGACTGGTGGGTGGGTGAAGTCATTGCAGTGCAAGTCAAGAGCATTTGAAGATGTTTACCACCCAAACCCCAAAATGCTGATACCCAGTGCCAGTTGCAGAAGAAGCGTTCAAAGCATCAAAGCATTGGTGGACATACCCAAGCCCAAGCCCAGAAAACCCAAGCCTAAGCCTCACTTAGAAAAACATCCAAGTTCACAGTACCCAACAACCACCGAACCTGAATTCGAAGCCCCTCTTAACAAAAGAGCCACCATGAACCGTTCACGTAGTAGCACTAACACTACCACCTCTTCCCGTTCCATCACTGAGCTTCCTGAGGGGCACCCTTCACGCAACGTCATTGAGATTATCTTCCACACAAGATGGGGTCCAAAGCCATTTCCGGGTCGGGTCGAGATGATATTCAAGGTTCAAAACGGGTCCCGGACCGTGTCACGATTCGAAGAGTTTCGCGAGGTGGTTAAATCTCGCGCCGCCGCTTCGGCGGGTTTGGCGGAGGGGAACAACTGGGAGGAGAATGCACGGTGTGTCGCCGATGGAAACGAGATGATGCGGTTTCACTGCTTGGGTCCCACTGAGGACGGTGCTCCCAATGGCTGTGCATGGTCGTTCCCTGAGTGTAAGGGATCGGCGATCTGCACGTTTTCCGGCAGTGGTGACGCCCATGAGACCGCCGGCGGAGGAAAAGGAAGAAGGGCAATGCTGGTTTGTAGGGTCATAGCGGGTCGTGTTTCAAAGCAACTCGGGTTTCTTGACTCGTTGTTGGACAAGCGAGTTGGGTTCGACTCAGTGAGTGGGGGCAAAGGCGAGTTGTTGGTGTTTGACCCGCGTGCGGTATTGCCATGTTTTCTTATTGTTTACAATTTGTAA	1005	0.5065	MSLLPQTLLLFLFFSFPHNNNNIRTQNKNSREREREKHCILLHVMTGGWVKSLQCKSRAFEDVYHPNPKMLIPSASCRRSVQSIKALVDIPKPKPRKPKPKPHLEKHPSSQYPTTTEPEFEAPLNKRATMNRSRSSTNTTTSSRSITELPEGHPSRNVIEIIFHTRWGPKPFPGRVEMIFKVQNGSRTVSRFEEFREVVKSRAAASAGLAEGNNWEENARCVADGNEMMRFHCLGPTEDGAPNGCAWSFPECKGSAICTFSGSGDAHETAGGGKGRRAMLVCRVIAGRVSKQLGFLDSLLDKRVGFDSVSGGKGELLVFDPRAVLPCFLIVYNL*	335

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g04245	334	Gene3D	-	144	333	-	-
	Rops2g04245	334	MobiDBLite	consensus disorder prediction	128	150	-	-
	Rops2g04245	334	PANTHER	C2H2-LIKE ZINC FINGER PROTEIN	50	332	-	-
	Rops2g04245	334	MobiDBLite	consensus disorder prediction	86	151	-	-
	Rops2g04245	334	SUPERFAMILY	ADP-ribosylation	146	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g04245	Rops-Chr2	77279369	77280373	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g04245	65	334	C2H2 Transcription Factor Family	AT2G29660	33.544	2.05e-32	122

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g04245	-		-	gmx:100792099	426.017