Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04244 ATGTCGGCTTACAGAGACGAGGATCCCCGTCTTCGTGGCATCAAAACTAAGATTAGTGTTGTCCCCCATTTCCCCAAACCTGGTATCATGTTCCAAGACATCACTACTCTATTGCGCGATCCCAAAGTCTTCAAGGACACGATAGATTTGTTCGTGGAGCGATACAAAGGCAAAAATATTTCTGTTGTTGCAGCAATTGAAGCTCGGGGTTTTTTTTTTGGTCCTTCCATTGCACTGGCAATAGGAGCAAAGTTTGTCCCATTGAGGAAACCAAAAAAATTGCCTGGCAAAGTTATTTCTCAAGAGTATATTTTAGAATATGGAAGGGACTGTATTGAGATGCATGTTGGAGCCGTTGAACCTGGTGAGCGTGTTTTAGTGGTTGATGATTTGATTGCTACCGGTGGAACACTCTGTGCAGCTATGGACTTACTCGAACGTGTGGGAGCAGAGGTAGTGGAGTGTGCGTGCGTAATTGAATTACCAGAATTAAAGGGTCGCGAACGGTTGAATGGGAAACCCCTGTTTGTGTTGGTCGAATGTTTTGAGTGCTGTCAGTAG 561 0.4456 MSAYRDEDPRLRGIKTKISVVPHFPKPGIMFQDITTLLRDPKVFKDTIDLFVERYKGKNISVVAAIEARGFFFGPSIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCIEMHVGAVEPGERVLVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLFVLVECFECCQ* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04244 186 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops2g04244 186 NCBIfam adenine phosphoribosyltransferase 14 180 IPR005764 GO:0003999|GO:0005737|GO:0006168
Rops2g04244 186 SUPERFAMILY PRTase-like 13 175 IPR029057 -
Rops2g04244 186 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Rops2g04244 186 Pfam Phosphoribosyl transferase domain 36 168 IPR000836 -
Rops2g04244 186 CDD PRTases_typeI 48 180 IPR000836 -
Rops2g04244 186 Gene3D - 2 181 IPR029057 -
Rops2g04244 186 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04244 Rops-Chr2 77273159 77277984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04244 1 181 PRT Gene Family AT1G27450 72.376 1.32e-92 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04244 K00759 - gmx:100790431 348.977