Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04234 ATGGCAGGAAAGCTACTCGGGCTTTCTTTGTTGGTCCTGAACCTTGTCCTTTCTTGCACTGCTGAATCCGCAGTTGCAAGAAGATCCAACCCAAACCCAATAGACTTCATCAAGTCCTCATGCAAGGCCACACGCTACCCTGCTGTATGCGTTCAAAGCCTCTCTGGTTTTGCAAACGTGATTGGCCAAAGTGAGCAACAACTAGCAATCACTGCCTTGAAGGTGAGCATATCAAGGACTATGTCAAGTGCATCATTTGTGAAGAAGATGGCCAAGGTAAAGGGGATTAAGCCTAGGGAGTACAGTGCTGTGCAAGATTGCAAAGAGAACATGGCTAACAGTGTGGACCGTCTAAGCCAATCGGTGAAGGAGCTACATAAGGGTAAGGATAAGAACTTGGAATGGCACATGAGCAATGTTCAGACTTGGGTTAGTGCTGCTCTCACTGATCAGACTACTTGTCTTGATGGCTTTGCTGGTTCTCACATGGATGGAAATTTGAAGGCTGCAATTAAGGGCAATGTTGTTGATGTTTCTCAAGTCACTAGTAATGCCCTTGCATTGGTTAATCGCTTTGCCTCGAATTACCGTTCTGCCCCATAA 603 0.461 MAGKLLGLSLLVLNLVLSCTAESAVARRSNPNPIDFIKSSCKATRYPAVCVQSLSGFANVIGQSEQQLAITALKVSISRTMSSASFVKKMAKVKGIKPREYSAVQDCKENMANSVDRLSQSVKELHKGKDKNLEWHMSNVQTWVSAALTDQTTCLDGFAGSHMDGNLKAAIKGNVVDVSQVTSNALALVNRFASNYRSAP* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04234 200 FunFam Pectin methylesterase inhibitor 1 32 192 - -
Rops2g04234 200 CDD PMEI-like_3 39 194 - -
Rops2g04234 200 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Rops2g04234 200 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 188 - -
Rops2g04234 200 Pfam Plant invertase/pectin methylesterase inhibitor 35 188 IPR006501 GO:0004857
Rops2g04234 200 NCBIfam pectinesterase inhibitor domain 9 190 IPR006501 GO:0004857
Rops2g04234 200 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 193 IPR035513 -
Rops2g04234 200 SMART PMEI_2 32 188 IPR006501 GO:0004857
Rops2g04234 200 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04234 Rops-Chr2 76943648 76944543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04234 17 189 Carbohydrate Esterase AT3G14310 31.818 8.00e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04234 - - gmx:100789460 255.758