Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04224 ATGGGTTCTCAACAAAACGATGGCACAAGCTATTCACCTTCAGAGCCGAAGCCCTGTGCCAACAACTGCGGCTTCTTCGGAACAGCCGGGAATCGGAACCTCTGTTCCAAATGCTACAGGGACTTGTTAATTCAAGAGGAGCGTGCCGCTTCCGCCAAAGCCGCCATGGAGAAATCCCTTCTCAGCCCCATAACCGCCGCCGCGCCGTCCCCCGATTCGGCCGTTCATGCGGCGGAACCCTCCTCATCCGTGAGGCCGTCGTTCGGTGGGGCTGCACTGTCGAAGGCGGTAAACCGGTGCGGCAGTTGTAACAAGAAAGTGGGGTTGACTGGGTTCGCGTGCAAGTGTGGGACCACCTTCTGTGGGACCCATCGTTATCCCGAGAAGCATCAGTGCTCATATGATTTCAAGGGTGCCGGACGTGATGCAATTTCCAAGGCCAATCCCGTTGTTAAGGCCGACAAGGTCGAGAGATTATAG 480 0.5646 MGSQQNDGTSYSPSEPKPCANNCGFFGTAGNRNLCSKCYRDLLIQEERAASAKAAMEKSLLSPITAAAPSPDSAVHAAEPSSSVRPSFGGAALSKAVNRCGSCNKKVGLTGFACKCGTTFCGTHRYPEKHQCSYDFKGAGRDAISKANPVVKADKVERL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04224 159 Gene3D - 70 155 IPR035896 -
Rops2g04224 159 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 61 - -
Rops2g04224 159 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 158 - -
Rops2g04224 159 Gene3D - 2 63 - -
Rops2g04224 159 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Rops2g04224 159 ProSiteProfiles Zinc finger AN1-type profile. 94 140 IPR000058 GO:0008270
Rops2g04224 159 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Rops2g04224 159 SUPERFAMILY AN1-like Zinc finger 93 154 IPR035896 -
Rops2g04224 159 MobiDBLite consensus disorder prediction 66 87 - -
Rops2g04224 159 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Rops2g04224 159 SMART AN1_Zf_4 100 137 IPR000058 GO:0008270
Rops2g04224 159 Pfam AN1-like Zinc finger 100 136 IPR000058 GO:0008270
Rops2g04224 159 FunFam Zinc finger AN1-type containing 6 76 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04224 Rops-Chr2 76794874 76795353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04224 12 159 C2H2 Transcription Factor Family AT3G52800 39.506 1.90e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04224 - - cpap:110817589 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04224 2 76794874 76795353 Rops2g04224 2 76794874 76795353 ECH