Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04205 ATGAATTCCCTTCATCTCCTCCTTCCTCTGTTTCTATTGGTTGCACTTCCAAGTCCACAACTGGTTCTTGGAAATGCAGAGGTCAGAGCTCTCATGGACTTGAAATCCTCTCTGGACCCCGAAGAAAAGTTCCTTGGCTCGTGGACCAGTGATGGTGATCCATGCAGTGGTTCTTTCTTGGGTGTTGCATGTAATGAGCACCACAAAGTAGCCAATATATCATTGCCAGGAAAGGGTCTTTCTGGACTGGTCTCTCCAGCGGTGGCTGAACTCAAATGCTTATCAGGTTTATATCTGCATTACAACAATCTTTATGGGGACATACCTAGAGAGATTTCAAGTCTCAATGAATTGGTCGACCTCTATCTCAACTTCAATAATCTATCTGGAACCATTCCTCCAGATATTGGGACCATGTCTAGCCTCCAAGTGCTGCATTTAGGCTATAACCAGCTAGTTGGGAACATACCTAAGCAGATGGATTCGTTGAAGCAGCTTAATGCTCTTGCTTTGCAACACAACAAATTAACTGGTCAAATTCCTCTAAGCTTGGGGAATTTGGAGAGGCTAAGGAGGCTAAATTTGAGCTTTAACAACTTCAATGGCGCGATCCCTGCAACACTAGCTGATATTGAACACTTGGAATTTCTAGATGTTCAAAACAATTCTCTTTCAGGAATTGTTCCTTCTGCATTGTTGAAGAGATTACGGGAAAGATTCCTAGGTGCTAACAACCCAGGTCTCTGTGGAGATAGGTTTTCTACTTTGAGAGCTTGCACCACAGATAAAAACTTTGGTGTCAACCAAATTGATACCTCCAATGTATCCATCCTGGAGCCTGCAAATACCCTGTTGCATTGTAACCAGACACGTTGCTCAAGATCTAGAAGGTTTCCTCATGCTGCCATTGCAGCAATTGTTACAACTATCTCTATCACATTAATTGCTGCTGGATTTTTCACATTTGTCAGATATCGCCGCCAAAGGCAAAGGATTATGAATACATTGGATCATTCTGAAGGCCAACTTAGTCCTGACCAGCCTAAAGAGTTTTCAAGAAGTCCATCTCCACTTGTTAATCGTGAGTATTCATATAATGGATGGGATTCATTGGCTGATGGTCAAATTACCAGTGAAATGCCCCATGCATATTTGAACCGTTTTAGGTTTAATGTTGATGAGGTTGAATCAGCAACACAGTACTTTTCTGAGGCCAATTTATTGAGTAAGAGCAAATTCTCAGAAGTCTATAAAGGAGTTCTCAGAGACGGTTCTCCTGTGGCTATTAGAAGTATTAGTGTGACTTACTGCAAAACTGAGGAAGCTGAATTTGTAGAGGGGTTGAGCTTATTAACCTCATTAAGACATGAAAACATTGTCAAGATGAGAGGTTTCTGTTGCTCAAGGAGTAGAGGTGAATGCTTTCTTCTCTATGACTTTGCCACCAGGGGTAAACTGTCTCAACATCTTGACAATGAAGATGGAAATGACAATGTGCTTGAGTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAAGGTATTGGATATCTGCACAGCAACGAAGCAAGCAAACCTACAATAGTACACCAAAATATTTCAGTTGAAAAGGTTATTCTTGACCATCAATTTAACCCTTTGATCATGGATGCTGGCCTCCCTAAGCTTCTTGCAGATGATGTTGTTTTCTCAGCTCTGAAATTAAGTGCTGCCATGGGATACCTAGCTCCTGAATATATTACTACTGGGCGCTTAACTGAGAAGAGTGACATATACGCATTTGGGGTCATTATTCTTCAAATTCTATCAGGGAAGACAACAGTAGGAAGTTCAATCCCGAAGACAGTTGACTCTTTCAGATTTGAAGATTCTGTGGATAAAAATCTGAAGGGAATATATTCTAAATCTGAAGCAGCAATTCTTTCAAAGCTAACAATGTTGTGCACCCATGAGCTTCCTGACCAAAGGCCAACCATGATGGAGGTGATTCAGGAGCTGAGCATGTGTGCTTCTCATTCTTCATGA 2028 0.4152 MNSLHLLLPLFLLVALPSPQLVLGNAEVRALMDLKSSLDPEEKFLGSWTSDGDPCSGSFLGVACNEHHKVANISLPGKGLSGLVSPAVAELKCLSGLYLHYNNLYGDIPREISSLNELVDLYLNFNNLSGTIPPDIGTMSSLQVLHLGYNQLVGNIPKQMDSLKQLNALALQHNKLTGQIPLSLGNLERLRRLNLSFNNFNGAIPATLADIEHLEFLDVQNNSLSGIVPSALLKRLRERFLGANNPGLCGDRFSTLRACTTDKNFGVNQIDTSNVSILEPANTLLHCNQTRCSRSRRFPHAAIAAIVTTISITLIAAGFFTFVRYRRQRQRIMNTLDHSEGQLSPDQPKEFSRSPSPLVNREYSYNGWDSLADGQITSEMPHAYLNRFRFNVDEVESATQYFSEANLLSKSKFSEVYKGVLRDGSPVAIRSISVTYCKTEEAEFVEGLSLLTSLRHENIVKMRGFCCSRSRGECFLLYDFATRGKLSQHLDNEDGNDNVLEWSKRVSIIKGIAKGIGYLHSNEASKPTIVHQNISVEKVILDHQFNPLIMDAGLPKLLADDVVFSALKLSAAMGYLAPEYITTGRLTEKSDIYAFGVIILQILSGKTTVGSSIPKTVDSFRFEDSVDKNLKGIYSKSEAAILSKLTMLCTHELPDQRPTMMEVIQELSMCASHSS* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04205 675 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Rops2g04205 675 MobiDBLite consensus disorder prediction 337 357 - -
Rops2g04205 675 SUPERFAMILY L domain-like 27 237 - -
Rops2g04205 675 Pfam Protein tyrosine and serine/threonine kinase 407 667 IPR001245 GO:0004672|GO:0006468
Rops2g04205 675 SMART LRR_typ_2 211 234 IPR003591 -
Rops2g04205 675 SMART LRR_typ_2 91 115 IPR003591 -
Rops2g04205 675 SMART LRR_typ_2 187 210 IPR003591 -
Rops2g04205 675 SMART LRR_typ_2 139 163 IPR003591 -
Rops2g04205 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 161 670 IPR046959 -
Rops2g04205 675 SUPERFAMILY Protein kinase-like (PK-like) 382 670 IPR011009 -
Rops2g04205 675 FunFam Protein NSP-INTERACTING KINASE 2 24 173 - -
Rops2g04205 675 Gene3D Ribonuclease Inhibitor 174 238 IPR032675 -
Rops2g04205 675 Gene3D Transferase(Phosphotransferase) domain 1 483 674 - -
Rops2g04205 675 Gene3D Phosphorylase Kinase; domain 1 370 480 - -
Rops2g04205 675 FunFam Protein NSP-INTERACTING KINASE 2 373 480 - -
Rops2g04205 675 Gene3D Ribonuclease Inhibitor 24 173 IPR032675 -
Rops2g04205 675 ProSiteProfiles Protein kinase domain profile. 402 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04205 675 FunFam Protein NSP-INTERACTING KINASE 2 481 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04205 Rops-Chr2 76464336 76468085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04205 1 515 Miscellaneous Gene Families AT4G22730 57.411 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Rops2g04205 PK_Tyr_Ser-Thr 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04205 - - gmx:100784155 981.089