Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04197 ATGGGCCTGAAGGATTGGCACAGTGATAGAACAACAACCCTGGTGGTAGTAGCATTTTTGGTAATTTCCGCGGTTACTTGGTACCTATGGTTCTACTTCCTCAAATTCAACACCAAGAGGCTGCCACCTGGTCCAACGGGCCTCCCCTTCTTAGGGAACCTTCTATCCCTGGACTCGGACCTTCACACTTACTTCACTGGGTTGGCCCGGATCCATGGCCCGATTTTCAAACTCCGATTCGGTAGTAAGCTTGCCATCGTGCTGACTTCGCCTTCCATGGCTCGTGAGGTCCTCAAAGACCACGACGCCGTTTTCGCCAACCGTGACGTGACCGCCGCCGCCAGGGTAGCCACATACGGCGGATCTGACATAGCATGGACCCCGTATGGACCCGAATGGAGGATGCTGAGGAAAGTGTGCGTGCTCGAGATGCTCAGCAAAACCACCCTGGATTCCGTGCACGATCTCCGTCGCAAGGAGCTCCAGAAAATGGTGGGGTATTTGCACACTCGGGTCGGGTCTCCGGTGAACGTGGGGGAGCAGGTGTTCTTGACGGTGCTGAACGTGATCACGAACATGATGTGGGGCGGGGCGGCGGAAGGGGTTGATAGGGAGACCTTGAGGGCGGAGTTCAGGGAGTTGGTGGCGGAGATGACGGAGCTTCTGGGGAAGCCGAACTTGTCGGACTTCTTTCCCGGGTTGGCCCGATTCGATTTGCAAGGTGTGGAGAAGCAGATGCATGCGTTGGTCCGTCGTTTCGATGGAATATTCGAGAAGATGATTGGTGAAAGGGTGAAGAAGGAGAATGAAGAAAGTAAGGATTTTCTGCAATTTTTGTTGAATTTGAAGGAAGAGGGTGGTGATTCCAAGACGCCACTCACCATCACCCACGTTAAGGCCCTCCTTATGGATATGGTGGTAGGTGGATCTGACACATCTTCCAACACAATTGAGTTTGCAATGGCAGAGATGATGCACAATCCAGAGGTAATGAAGAGAGTTCAAGAGGAATTGGAAGCTGTAGTTGGGAAAGATAACATGGTAGAAGAGTCCCATATTCATAAGCTGCCCTACTTACAAGCTGTGATGAAAGAAACTTTACGATTGCACCCGGCACTTCCACTTTTAGTCCCTCACTGCCCCAGTGAAACCACCACTGTGGGAGGCTACACAATCCCAAAGGGATCTCGGGTGTTTGTGAACGTGTGGGCCATTCATAGAGACACTTCCATATGGGAGAAACCACTAGAATTTGATCCTACGAGGTTCTTGGATGCCAAATGGGATTACGGTGGAAGTGACTTCAACTATTTCCCCTTTGGCTCTGGAAGAAGAATATGTGCAGGAATAGCAATGGCTGAAAGGACGGTTTTATATTTTCTTGCCACACTTGTGCACCTATTTGATTGGACAATTCCCCAAGGAGAAAGGTTGGATGTATCAGAGAAATTTGGTATTGTTCTCAAAAAGAAAATACCTCTGGTTACCATCCCCACCCCACGATTGTCGAATCCAGATCTTTATAAATAG 1530 0.4993 MGLKDWHSDRTTTLVVVAFLVISAVTWYLWFYFLKFNTKRLPPGPTGLPFLGNLLSLDSDLHTYFTGLARIHGPIFKLRFGSKLAIVLTSPSMAREVLKDHDAVFANRDVTAAARVATYGGSDIAWTPYGPEWRMLRKVCVLEMLSKTTLDSVHDLRRKELQKMVGYLHTRVGSPVNVGEQVFLTVLNVITNMMWGGAAEGVDRETLRAEFRELVAEMTELLGKPNLSDFFPGLARFDLQGVEKQMHALVRRFDGIFEKMIGERVKKENEESKDFLQFLLNLKEEGGDSKTPLTITHVKALLMDMVVGGSDTSSNTIEFAMAEMMHNPEVMKRVQEELEAVVGKDNMVEESHIHKLPYLQAVMKETLRLHPALPLLVPHCPSETTTVGGYTIPKGSRVFVNVWAIHRDTSIWEKPLEFDPTRFLDAKWDYGGSDFNYFPFGSGRRICAGIAMAERTVLYFLATLVHLFDWTIPQGERLDVSEKFGIVLKKKIPLVTIPTPRLSNPDLYK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04197 509 Gene3D Cytochrome P450 35 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 CDD CYP76-like 69 498 - -
Rops2g04197 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PANTHER OS08G0547900 PROTEIN 9 509 - -
Rops2g04197 509 FunFam Cytochrome P450 - like protein 31 495 - -
Rops2g04197 509 Coils Coil 204 224 - -
Rops2g04197 509 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04197 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Rops2g04197 509 SUPERFAMILY Cytochrome P450 42 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04197 Rops-Chr2 76375930 76379740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04197 9 508 Cytochrome P450 AT4G12300 59.369 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04197 - - gmx:100787507 823.157