Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04196 ATGATTCCGCTTCCAACTTTGTTTCAAGAGTTGAAGGATTGGTACAGTGACAGCATAACCCTGGTCATAGCACTCTTGGTCATTTCCACAGTTACTTGGTACCTATGGTCCTACGCCCACAGCAAGAGGCTGCCACCAGGCCCGCCGGGCCTCCCTTTCTTCGGGAACCTTCTATTCCTGGATCCGGAACTTCACTCTTACTTCGCCGGGTTGGCCCAGATTCACGGCCCGATTTTCAAGCTCCAACTCGGGAGCAAGCTTGGCATCGTGTTGACTTCACCTTCCATGGCTCGTGAGGTCCTCAAAGAACACGACACCGTTTTCGCCAACCGTGACGTGCCCGCCGCCGGCAGGGCAGCCACATACGGCGGCTCCGACATAGTGTGGACCCCGTACGGACCCGAATGGAGGATGCTGAGGAAAGTGTGCGTGCTCAAGATGCTCAGCAACACCACCTTGAATTCCGTTTACGATCTCCGCCGCAAGGAGGTTCAGAAAACGGTCGGGTATATACACAATCGGGTCGAGTCTCCGGTGAACGTGGGAGAACAGGTGTTCTTGACGGTGATGAACGTGATCACGAGCATGATGTGGGGCGGGACGGCGGAAGGGGCGGATAGGGAAACCTTGGGGGCTGAGTTCAGGGAGTTGGTGGCTAAGATGACGGAGCTTCTGGGGAAGCCGAACTTGTCGGACTTCTTTCCCGGGTTGGCCCGATTTGATATGCAAGGTGTGGAGAAGCTGATGCATGCGTTGGTCCGTCGTTTCGACGGAATATTCGAGAAGATGATTGTTGAGAGGGTGAGGAAGGAGAATGAAGAAAGTAAGGATTTTCTGCAGTTTTTGTTGAATTTGAAGGAAGAGGGTGGTGATTCGAAGACGCCACTCACCATCACCCACGTTAAGGCCCTCCTTATGGACATGGTAGTAGGTGGATCTGACACATCTTCCAACACAATTGAGTTTGCAATGGCAGAGATGATGCACAAGCCGGAGGTAATGAAGAGAGCTCAAGAGGAATTGGAAGCTGTAGTTGGGAAAGATAACATGGTAGAAGAGTCTCATATTCATATGCTGCCCTACTTGCATGCTGTGATGAAAGAAACTCTTCGATTGCACCCTGCACTTCCACTTTTAGTCCCTCACTGCCCCAGTGAAACCACCACTGTGGGAGGCTACACAATCCCAAAAGGATCTCGAGTGTTTGTGAACGTGTGGGCTATCCATAGAGATCCTTCCATTTGGGAGAGACCATTAGAATTTGATCCTACGAGGTTCTTGGAAGCCAAATGGGATTACAGTGGAAGTGACTTCAACTATTTCCCCTTTGGCTCTGGAAGAAGAATATGTGCAGGAATAGCAATGGCTGAAAGGACGGTTTTATATTTTCTTGCCACACTTGTGCACCTATTTGATTGGACAATACCCCCAGGAGAAAGGTTGGATGTATCAGAAAAATTTGGTATTGTTCTAAAAAAGAAAATACCTCTAGTTGCCATCCCCACCCCACGATTGTCCAATACAGATCTTTACAAATAA 1539 0.4977 MIPLPTLFQELKDWYSDSITLVIALLVISTVTWYLWSYAHSKRLPPGPPGLPFFGNLLFLDPELHSYFAGLAQIHGPIFKLQLGSKLGIVLTSPSMAREVLKEHDTVFANRDVPAAGRAATYGGSDIVWTPYGPEWRMLRKVCVLKMLSNTTLNSVYDLRRKEVQKTVGYIHNRVESPVNVGEQVFLTVMNVITSMMWGGTAEGADRETLGAEFRELVAKMTELLGKPNLSDFFPGLARFDMQGVEKLMHALVRRFDGIFEKMIVERVRKENEESKDFLQFLLNLKEEGGDSKTPLTITHVKALLMDMVVGGSDTSSNTIEFAMAEMMHKPEVMKRAQEELEAVVGKDNMVEESHIHMLPYLHAVMKETLRLHPALPLLVPHCPSETTTVGGYTIPKGSRVFVNVWAIHRDPSIWERPLEFDPTRFLEAKWDYSGSDFNYFPFGSGRRICAGIAMAERTVLYFLATLVHLFDWTIPPGERLDVSEKFGIVLKKKIPLVAIPTPRLSNTDLYK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04196 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Rops2g04196 512 Gene3D Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 FunFam Cytochrome P450 - like protein 34 498 - -
Rops2g04196 512 SUPERFAMILY Cytochrome P450 45 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PANTHER OS08G0547900 PROTEIN 17 512 - -
Rops2g04196 512 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 Pfam Cytochrome P450 45 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 CDD CYP76-like 72 501 - -
Rops2g04196 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04196 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04196 Rops-Chr2 76366841 76371081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04196 22 511 Cytochrome P450 AT4G12300 60.765 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04196 - - gmx:100783085 816.994