Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04192 ATGTATTATTTCCTTTTCTTTGCTCTCACTTTTGTGTTGGGCTACCATATTCATATTGCTCAAGGAAGTGAACTGCCCCTTACCACTGAGAGTACCGAGACAACCAGTTCAAAAACATACATTATCCAAGTGAAGGGTCCAGAGGGTAAGATATTTACTCAATCAGAAGATTTAGAGAGCTGGCACCATTCATTCATGCCACCAACTGTTCTGAGCTCCTCTGAGGAACGGCCTCGAATGATTTATTCATACCAGAATGTGCTGAGCGGTTTTGCTGCAAGACTCACTCAAGAGGAGCTGAGAGCCATGGAAAAGAAAAATGGCTTTATTTCAGCTCATCCAGAAAGGATGCTACGTCGTCAAACCACACATACCCCAAAATTCTTGGGGTTGCTGCAGCAAATGGGATTATGGAAGGAATCAAATTTTGGAAAGGGGGTTATTATTGGGGTGCTGGATTCTGGAATCACGCCTGGTCATCCTTCATTTAGTGATCAAGGAATGCCACCACCACCACCCAAATGGAAAGGGAAATGCGATCTTAATGCAACAGCTTGTAACAACAAACTAATTGGAGCAAGGTCTTTCAACCTTGCAGCTAAGGCAATGAAAGGAGAGAAAGCAGAGGCACCAATTGATGAGGATGGACATGGGACTCACACAGCAAGCACAGCAGCTGGTGCTTTTGTAGATCATGCTGAAGTACTAGGAAATGCCAAAGGCACAGCTGCAGGGATGGCCCCTTATGCTCACCTGGCAATTTACAAAGTATGCTTTGGAGAAGACTGCCCTGAGAGTGATATACTAGCTGCATTAGATGCGGCTGTGGAGGATGGTGTGGATGTAATATCAATATCCCTCGGTCTAACTGAGCCACCTCCATTTTTCAATGATAGCACTGCAATAGCTGCATTTGCAGCAATTCAAAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTTTGGTCCTTCCGATGCCTCCTTGGTTAATGGAGCCCCATGGATCCTCACAGTTGGAGCCAGCACTATTGACAGAAGCATTGTAGCAACAGCAAAGCTTGGAAATGGGCAAGAATTTGATGAATCTGCATTTTGTGCTAATGGATCCTTGAATGACATTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGATATAGCAAGAATTGCCAAAGGAGAGGAAGTAAAAAGAGCTGGTGGTGCAGCCATGATTCTCATGAATGATAAAATTAATGGCTTCAGTCTCTCAGCTGACGTACATGTTCTACCTGCAACGCACGTAAGCTATGCTGCTGGACTAAAGATTAAGGCCTATATAAAGTCCACTGTGACACCTACAGCAACCATTTTATTTAAGGGAACTATCATTGGAAACTCCCTATCCCCTGCCGTCACATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTTTGAAACCAGATATCATAGGACCTGGCATGAACATCCTAGCTGCCTGGCCATTCCCCCTGGATAACAGCACCGATTCAAAACTCACTTTCAACATTATGTCTGGCACATCAATGTCATGCCCACATCTCAGTGGCATTGCTGCTCTCCTCAAAAGCTCTCATCCTTATTGGTCACCAGCTGCCATAAAATCTGCCATAAATACTTCTGCAGGCACACTAAATTTAGAAAACAAACCCATTGTTGATGAAACACTTCAGCCTGCAGGCTTCTTTGCCACAGGTTCTGGCCATGTGAATCCATCAAGAGCAAATGATCCTGGACTAGTTTATGACATACAACCTGATGATTATATACCTTATCTGTGTGGTTTAGGCTACAGTGATACAGAAGTTGGGATCATTGCACATAGAACAATTAAGTGCTCTGACACTTCAAGCATTCCCGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGTGCTTGGTTCCACACAGACATTCACAAGGACTGTGACAAATGTTGGTGAAGCCAATTCATCTTATGCTGTCATAGTTACGGCACCAGAAGGGGTTAACGTGAGGGTCCAGCCAGATATGCTTTACTTCTCAGAACCGAACCATAAAGAGACATATTCAGTGACATTCAGTCGCCTGGGGTTGGGTAATAAGACACAGGAATACGCTCAAGGGTTTCTAAAATGGGTCTCTGCCAAACACACTGTAAGGAGCCCTATCTTGGTCAAATTTGTATAG 2196 0.4431 MYYFLFFALTFVLGYHIHIAQGSELPLTTESTETTSSKTYIIQVKGPEGKIFTQSEDLESWHHSFMPPTVLSSSEERPRMIYSYQNVLSGFAARLTQEELRAMEKKNGFISAHPERMLRRQTTHTPKFLGLLQQMGLWKESNFGKGVIIGVLDSGITPGHPSFSDQGMPPPPPKWKGKCDLNATACNNKLIGARSFNLAAKAMKGEKAEAPIDEDGHGTHTASTAAGAFVDHAEVLGNAKGTAAGMAPYAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLTEPPPFFNDSTAIAAFAAIQKGIFVSCAAGNFGPSDASLVNGAPWILTVGASTIDRSIVATAKLGNGQEFDESAFCANGSLNDIDFRGKVVLCERGGDIARIAKGEEVKRAGGAAMILMNDKINGFSLSADVHVLPATHVSYAAGLKIKAYIKSTVTPTATILFKGTIIGNSLSPAVTSFSSRGPNLPSPGILKPDIIGPGMNILAAWPFPLDNSTDSKLTFNIMSGTSMSCPHLSGIAALLKSSHPYWSPAAIKSAINTSAGTLNLENKPIVDETLQPAGFFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSDTEVGIIAHRTIKCSDTSSIPEGELNYPSFSVVLGSTQTFTRTVTNVGEANSSYAVIVTAPEGVNVRVQPDMLYFSEPNHKETYSVTFSRLGLGNKTQEYAQGFLKWVSAKHTVRSPILVKFV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04192 731 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 149 160 IPR023827 -
Rops2g04192 731 Pfam Fibronectin type-III domain 632 728 IPR041469 -
Rops2g04192 731 CDD Peptidases_S8_3 121 551 IPR034197 -
Rops2g04192 731 Gene3D - 602 730 - -
Rops2g04192 731 Pfam PA domain 358 437 IPR003137 -
Rops2g04192 731 FunFam Subtilisin-like protease SBT1.5 146 354 - -
Rops2g04192 731 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Rops2g04192 731 PRINTS Subtilisin serine protease family (S8) signature 515 531 IPR015500 -
Rops2g04192 731 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Rops2g04192 731 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 120 IPR037045 -
Rops2g04192 731 Gene3D Peptidase S8/S53 domain 460 598 IPR036852 GO:0004252|GO:0006508
Rops2g04192 731 Gene3D Peptidase S8/S53 domain 146 343 IPR036852 GO:0004252|GO:0006508
Rops2g04192 731 Pfam Subtilase family 144 554 IPR000209 GO:0006508|GO:0008236
Rops2g04192 731 Pfam Peptidase inhibitor I9 39 119 IPR010259 -
Rops2g04192 731 SUPERFAMILY PA domain 370 431 IPR046450 -
Rops2g04192 731 SUPERFAMILY Subtilisin-like 121 589 IPR036852 GO:0004252|GO:0006508
Rops2g04192 731 Gene3D - 344 360 - -
Rops2g04192 731 Gene3D - 361 459 - -
Rops2g04192 731 CDD PA_subtilisin_like 350 451 - -
Rops2g04192 731 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 73 727 IPR045051 -
Rops2g04192 731 ProSiteProfiles Serine proteases, subtilase domain profile. 126 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04192 Rops-Chr2 76307297 76309570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04192 25 728 Subtilisin-like Serine Gene Family AT1G04110 44.401 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04192 - - gmx:100785376 1176.39