Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04182 ATGCTGTTGACACGTGACATTGTTTGGCACCCATATGATTCCACTTCATGTGTTGGCACTTTGTGGGCCATTCTCTTTGTTGGTGATTGTGGAACTGGCAATCAATCAGTCAGTCATCCCTACTCTTTCTCTTTCTTCTTTTTGAGTTTTTATCTGTTTTCTCAGCTAAATTGTTCTAGGGTTTCTGCGATCGAGCCTGCAGTCACTTCCTTAATAGTAGAGTCTACTCTCAGAGCTGAGTTAACAAAAGATTCTATTGTTTGCTTCCAGATTAGTCAGTTCAGATCCGTCACAAAAGAAGCCGTTCATTCATCAGAATGTTCAAGTATAAACAAAACAGTCGAACGCTATCAAAGGAAAGTCAAGGACCAGGGTCTCAGCACCAAAGGAATCCAAGAAAATACACAGCATCTAAAGGAAGGTGATATCAGCATGGCAAAGAAGATCGAGCACCTAGAACTTTCCAAAAGGAAGCTTTTGGGAGATGAATTGGATAGATGCGCCATTGACGAGTTACAACAGATAGAGGACCAGCTCGAACGCAGCTTAAACAGAATTAGGGCAAGAAAGAGTCAATTGTTCAAGGAGCGAATTGAGAAGCTAAGAGAAGAGGAAAGGCAGCTACTTGAGGAAAATAGACGCTTACGCGCGCAGATTGAACGGCATCGTTCTTTAAGTAAACAAGATGTGGAACTCATTACAGAAAGGCAGGGCGAAGAGGAGGTGGAGACGGAGTTGTTCATAGGGCGACCTGAGAGACGAATGCCTTAA 771 0.4306 MLLTRDIVWHPYDSTSCVGTLWAILFVGDCGTGNQSVSHPYSFSFFFLSFYLFSQLNCSRVSAIEPAVTSLIVESTLRAELTKDSIVCFQISQFRSVTKEAVHSSECSSINKTVERYQRKVKDQGLSTKGIQENTQHLKEGDISMAKKIEHLELSKRKLLGDELDRCAIDELQQIEDQLERSLNRIRARKSQLFKERIEKLREEERQLLEENRRLRAQIERHRSLSKQDVELITERQGEEEVETELFIGRPERRMP* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04182 256 Coils Coil 169 225 - -
Rops2g04182 256 Pfam K-box region 134 219 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops2g04182 256 ProSiteProfiles K-box domain profile. 135 225 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04182 Rops-Chr2 76167445 76178532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04182 107 254 MADS-box Gene Family AT4G22950 47.436 1.90e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04182 - - gmx:100805260 195.667