Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04178 ATGGCGTCGTCGTATCAAGAAAAGCATGAGATGGATCAAGACGACGACGGAGGAACGACGGACCTCAGCACCAGCGACGGAGGAGACCCACACAGGGACCCATCTGAAACCAACAACACCAATGAAGTCTCCAAACAGCGCACGTTAGAGGATACCACAGGCTTCCAAGTCTTGCCCCTGAAAGAGGAACCAACAACCTATTCGGACCCTGACCCGGACCCCAAGACTCACCGTGCCCCTATGGGTATTGTTCCTGTGGCGATGCCCATGCCGGTTAAACCAACAAGGCGCTCCTCCACCAAGGACCGCCACACCAAGGTGGAGGGCCGTGGCCGCAGGATCCGAATACCCGCCACGTGTGCTGCTCGGATCTTTCAGCTGACCCGGGAATTAGGTCACAAGTCCGACGGAGAAACCGTTCGGTGGCTACTAGAACACGCCGAGCAGGCCATCATCGAGGCCACCGGAACCGGAACCGTTCCTGCCATCGCCGTCTCCGTCGGGGGCACTCTTAAAATCCCAACGACGTCGTCGAGCGCGGTCGACGAAGCCGCCGTTAACAAGAAACGGAAACGGCCGTCCAACAGCGAGTTCGTGGACGTAAACGACGCCGTTTCGTTGTCATCCGGTTTAGCACCGGTTCAAGCCGTAGTACCACAAGGTCTGGTTCCGGTCTGGGCCGTGGGTAACACCAGTATGGTGGTCCCCACGAACACCTTCTGGATGATCCCACCGGCGGCGGCGACGTCGAACCAGCAACCTCAGATATGGGCTTTATCTCCGTCGGTGTTCAACATGGCGGCCAGGCCGGTGGTGGCTACAACGAACATTCCAGAAGCTTGGCCGGTGACGGCGGGTTGCAGTAACACATCTAACTCGGTGGGGCCCAAGGTGGCAACGAAGTCCAACATGGCACCGAGTGTTAGTTCCAGCGGTGGTAGTGGTAGTAGCAAGGCTCAGATGTTAAGAGATTTTTCATTGAAAATTTACGATAAGCAAGAGTTGCAGTTCATGGGCAGGTCTGGGACTCTGAGCCAAAACGCTCAAACTTCCAATCAATGA 1062 0.5659 MASSYQEKHEMDQDDDGGTTDLSTSDGGDPHRDPSETNNTNEVSKQRTLEDTTGFQVLPLKEEPTTYSDPDPDPKTHRAPMGIVPVAMPMPVKPTRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSSAVDEAAVNKKRKRPSNSEFVDVNDAVSLSSGLAPVQAVVPQGLVPVWAVGNTSMVVPTNTFWMIPPAAATSNQQPQIWALSPSVFNMAARPVVATTNIPEAWPVTAGCSNTSNSVGPKVATKSNMAPSVSSSGGSGSSKAQMLRDFSLKIYDKQELQFMGRSGTLSQNAQTSNQ* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04178 353 MobiDBLite consensus disorder prediction 1 109 - -
Rops2g04178 353 ProSiteProfiles TCP domain profile. 100 154 IPR017887 -
Rops2g04178 353 Pfam TCP family transcription factor 99 190 IPR017887 -
Rops2g04178 353 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 36 330 IPR005333 GO:0003700
Rops2g04178 353 MobiDBLite consensus disorder prediction 291 319 - -
Rops2g04178 353 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04178 Rops-Chr2 76074564 76075769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04178 47 347 TCP Transcription Factor Family AT2G45680 45.672 1.87e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops2g04178 TCP 1.7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04178 - - gmx:100781096 415.231