Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04177 ATGACAAGTATGGGAGCTGCTTATGGAACTGCAAAGAGTGGAATGAGAGTAGCTTCTATGGGTCTTATGAGACCTGAGCTGGTGATGAAATTCATTGTCTTTGTGGTTATGGCTGGAGTGTTGGGAATTTATGGGTTGATTACAGCTGTTATCATTAGAATTGGAATAAACCCCAAGGCTAAATCTTATTATCTCTTTAATGGCTATGCCCTCTTGTCCTCTGGCCTTATTGGTCTCTCTGCTGGAATGGCTATTGGAATTGTTGGTGATGCTTGA 276 0.4167 MTSMGAAYGTAKSGMRVASMGLMRPELVMKFIVFVVMAGVLGIYGLITAVIIRIGINPKAKSYYLFNGYALLSSGLIGLSAGMAIGIVGDA* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04177 91 Gene3D - 1 91 IPR035921 -
Rops2g04177 91 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 91 - -
Rops2g04177 91 Pfam ATP synthase subunit C 2 52 IPR002379 GO:0015078|GO:0033177|GO:1902600
Rops2g04177 91 PRINTS Vacuolar ATP synthase 16kDa subunit signature 6 30 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops2g04177 91 PRINTS Vacuolar ATP synthase 16kDa subunit signature 79 91 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops2g04177 91 PRINTS Vacuolar ATP synthase 16kDa subunit signature 32 56 IPR000245 GO:0033179|GO:0046961|GO:1902600
Rops2g04177 91 NCBIfam V-type ATPase subunit C 2 91 IPR011555 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04177 Rops-Chr2 76060709 76060984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04177 2 91 Primary Pumps ATPases(2) AT1G19910 81.915 1.08e-43 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04177 K02155 - csin:114290637 138.272