Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04173 ATGGCTTCTAGCTGTGGCAAACCTTTGTGTGATGGTTCTATTACACAAATCACCAAACATGCCCCAAGAAGGTCCTCCCTTTTGCTCAAGGACTACCTCAGGGATGATCTGAGTTCATGTTCATCAAGCGGTTTCAAATCGTTGCCGCGTCGACAATGCTGCACTACCGTTGGATTTCTCATGGAGAAAGATCTCCAACTCCAACGTAAGAGAAGGAACACAATCCCTCGACGACCCATATCAGTTTTGCAGAAAGCTTTCAATGCCATAAAGTCACTGCCCTTGTCCCAAAAGAGTGCTAAAGCCAAGAAAGCTGCTACTGGTCTTCTTTCTAGAAGCATCTCGAGGAAGCTGTTAAGCAGAAGCTTCTGGAGGAAAGAGGGAAGAGAAGGTGAAGCGAGGTGCAGGAGGTCTTTCCGTGAACTACTAATGCAGGAACGAGATAAAACGACGTCGATGAATGAGGATAACATATCCACTGCCCCTCCAAGCATCACCTCCAACTCTTCAGGTTCTGGTAGTTTTAGCTGGGGAGAGAGTCAATTCACTTTTTCATCAAGCACTATTACTTCTTCTGACACCTCCAACGAAAATGACCTAGTTGAGGGTCCCAAAGAGGCTGCGTCTCCTCACAAGATAGAAGGAGTAACCGCCAGGGATTGGCCAAACGAGAAGGAACAACTCAGTCCTGTATCGGTGCTAGGTTGCCCATTTGAAGATGAAGAAGAGATCAATTCTCAATTCAGCTCCACTATTGAAGGAGCTGAACACAAGCAAATGCAGAAGAGACGACATTTTAAAAGCCTGGCTTCACTGGAGCCAGTGGTTTTAGAGAAAAGGATCGCATTGTCAGAACAGGAAGATGAACCACACAATAACCACCATTCTACAAAAGAATGCGAACCAATTATGTGCACACAAAACGTGAATTACGATAACATCGAGGAGAATGCACGCGACCTTCTCAATTTCGTTATAGGGTCAATTCCATTCAACTGTTTGGATTTGATAATTAAGACAGAGAACCTACTGTTTGACTACTTCAAGCAAAGCATTGAGGAAAATAATGATATTGATCATCATGCAAAGAAGCTTCAACATTGCAAGGTAGCTGAAAATTGGATAAGAGGACAACCCCAAGAAATGTATTTGGGTTGGGAAGTGCAAGAAGGAAGAGGTGTCTACATTAGTGAGATGGAAAAGTGTGGGGAGTGGAAAAACTCAGATCAAGAAATACAACAATTGGCCATGGAGCTGGAAAACGAGGTCTTCACTTCTTTGGTTAACGAGATTGTCCTTGACATCACGATGTGCTAA 1317 0.4389 MASSCGKPLCDGSITQITKHAPRRSSLLLKDYLRDDLSSCSSSGFKSLPRRQCCTTVGFLMEKDLQLQRKRRNTIPRRPISVLQKAFNAIKSLPLSQKSAKAKKAATGLLSRSISRKLLSRSFWRKEGREGEARCRRSFRELLMQERDKTTSMNEDNISTAPPSITSNSSGSGSFSWGESQFTFSSSTITSSDTSNENDLVEGPKEAASPHKIEGVTARDWPNEKEQLSPVSVLGCPFEDEEEINSQFSSTIEGAEHKQMQKRRHFKSLASLEPVVLEKRIALSEQEDEPHNNHHSTKECEPIMCTQNVNYDNIEENARDLLNFVIGSIPFNCLDLIIKTENLLFDYFKQSIEENNDIDHHAKKLQHCKVAENWIRGQPQEMYLGWEVQEGRGVYISEMEKCGEWKNSDQEIQQLAMELENEVFTSLVNEIVLDITMC* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04173 438 MobiDBLite consensus disorder prediction 154 173 - -
Rops2g04173 438 PANTHER OS04G0572500 PROTEIN 23 434 - -
Rops2g04173 438 MobiDBLite consensus disorder prediction 150 173 - -
Rops2g04173 438 MobiDBLite consensus disorder prediction 186 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04173 Rops-Chr2 75981845 75984536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04173 23 437 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 30.917 5.97e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04173 - - gmx:102663212 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04173 2 75981845 75984536 Rops2g04173 2 75981845 75984536 ECH