Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04165 ATGTTGGCTGGGTGTTCTAGTTCAACATTGTTGTCACCAAGGCACAGATTGAGGAGTGAAGCATCTGCACAGTTTCAAGCTTGCCATTTTCAGCTACCTTCCATGAACACACAGAGATTGGACTTGCCATGTAGTAGCTTCCCTCGGAAAGACACCTCCTCACGTTCACAGCCTTTAAGGCCTGTGGGGATTTCTGTGGAGAAGCCTCCAGAAACCAAGAGCAGCACTTGTTCTTTGAAGCAGAACATTCGACTTCCACCTTTGGCAACTACCACTAGCGCTCAGACAACAGCACCATTGGGAGAGATCAAAGAGGAGTTTTGGGAGAAGGGTGGTGGGAAGAGTTTGAAGAGGCTTGCAGAACATGGATCTGGGGATGAGTCATTCACCAACAGAGCTAAGAGAACAAAGGGTAGCAATGGAAATGGGAATTCTGATGAGGGAGGGGATAGTTTGAGTTTAGCACAAATGGGAGCTGGTAACTTTTGGTCTGTTCAGAGTTTTGGAGGCCTTAACCCTTCTTCACTTCCTTTCTCTCTGAATTGTCCAGGGGATGAGGAAAGGGTATGTTATGTTCCTGCTGAAGTGATTTCTGCACCTTTGCCTTTATCCAACAATCCTTGGCTGGAATCTGCCGTGACAAAGATCACCAATTTTGGTGAGTCCAGCCACCACCACCATCATGTCAAGGAAGGTTCAGTCTCTAATGCTTCATCAGAGAGCCAAAGCTTAAGCCTGAGGTTAAATGAGAATGTGTCAGAACATGAAGTGGGAAATGGTTCAGGGAATCCTTATCACCATGAAGGCACTGAGGTGGAGACAGGAGAAGAGGATGATCAAGAGGAGCATCGTGGGTTGGAGTTGGTCAGCTTGCTCACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTGGCTGCAATCAATCATTTCATAGCGAGATTGGGTGATCTTGCATCTCCAAGGGGAACCTCCATAAGCCGCATTTGTGCTTATTTTACAGAAGCCTTAGCCATCAGGGTCACCAGGCTTTGGCCTCATATTTTTCACATCACCACTACTTCTCGTGACCTAGATAGGGTGGTGGATGATGATGAAACTGGCACTGCACTGAGGCTTCTAAACCAGGTGAGCCCAATTCCAAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGACAGGGTTCACATTATAGATTTTGACATAAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCTAGGACTAATCCTCCAAGCCACGTCAGAATCACGGGTATAGGGGAGTCCAAGCAAGAACTGAATGAAACCGGAGACAGGCTTGCTGGTTTTGCCGAGGCATTGAACCTTCCCTTTGAGTTCCATCCAGTGGTGGACAGACTTGAAGACGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTTTGCAGCTCCACAAGACCCTTTATGATGGGAGTGGAGGAGCATTGAGGGACTTTTTGGGCCTCATCCGCAGCACAAATCCTACCATTGTGGTTGTGGCAGAGCAAGAAGCAGAACACAATGAGGCCAGGTTGGAAGCAAGAGTATGCAATTCGTTGAAATATTACTCAGCTTTGTTTGATTCCATTGATCATAGTGGCCTTCCACAAGAGAGTCCAATGAGGATTAAGATAGAGGAGATGTATGCTCGGGAGATCAGGAACATCATTGCTTGCGAAGGAAGGGACAGGTTGGAGAGGCACGAGAGTTTTGGGAATTGGAGGAAGATGATGGTGGAGCAGGGAGGGTTCAGATGCATGGGAGTTACGGAGGGGGAAACCATTCAGAGCCAGTTGCTATTGAAGATGTATTCTTGTGATAATCAGAGTGTCAAGAAGCAGGAGACGGAAGGAGGAGAAGCACTTACTCTGAGTTGGCTTGATCAGCCTCTATATACAGTTTCAGCATGGGCACCAGTTGATGCTGCAGGCAGCTCATCCTCTTTTTCTCAACAACAAACTTGA 2034 0.468 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQLPSMNTQRLDLPCSSFPRKDTSSRSQPLRPVGISVEKPPETKSSTCSLKQNIRLPPLATTTSAQTTAPLGEIKEEFWEKGGGKSLKRLAEHGSGDESFTNRAKRTKGSNGNGNSDEGGDSLSLAQMGAGNFWSVQSFGGLNPSSLPFSLNCPGDEERVCYVPAEVISAPLPLSNNPWLESAVTKITNFGESSHHHHHVKEGSVSNASSESQSLSLRLNENVSEHEVGNGSGNPYHHEGTEVETGEEDDQEEHRGLELVSLLTGCVDAIGSRNVAAINHFIARLGDLASPRGTSISRICAYFTEALAIRVTRLWPHIFHITTTSRDLDRVVDDDETGTALRLLNQVSPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPTIVVVAEQEAEHNEARLEARVCNSLKYYSALFDSIDHSGLPQESPMRIKIEEMYAREIRNIIACEGRDRLERHESFGNWRKMMVEQGGFRCMGVTEGETIQSQLLLKMYSCDNQSVKKQETEGGEALTLSWLDQPLYTVSAWAPVDAAGSSSSFSQQQT* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04165 677 ProSiteProfiles GRAS family profile. 279 661 IPR005202 -
Rops2g04165 677 MobiDBLite consensus disorder prediction 134 153 - -
Rops2g04165 677 MobiDBLite consensus disorder prediction 45 60 - -
Rops2g04165 677 MobiDBLite consensus disorder prediction 221 282 - -
Rops2g04165 677 MobiDBLite consensus disorder prediction 45 77 - -
Rops2g04165 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 657 IPR005202 -
Rops2g04165 677 MobiDBLite consensus disorder prediction 116 153 - -
Rops2g04165 677 Pfam GRAS domain family 288 660 IPR005202 -
Rops2g04165 677 MobiDBLite consensus disorder prediction 234 258 - -
Rops2g04165 677 MobiDBLite consensus disorder prediction 116 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04165 Rops-Chr2 75846592 75849844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04165 1 660 GRAS Transcription Factor Family AT1G63100 57.670 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g04165 GRAS 5.1e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04165 - - tcc:18606459 962.214