Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04161 ATGGGAAAGGTGTCAAAGTGGTTTCGCGGGCTTCTTGGTCTGAGAAAATCAGACTGTAACTCAACTCTGAAGCCGCCGAAAGAGAAACGCCGTTGGAGCTTCGTCAAATCATACAGAGAAGAAGAAGAAGAAGAAAACAACAATCATGCTACCGCTAACCGTGCCGATACCTTACCACAACCAGAACACGTGGACAACAAGCACGCCATGGCAGTAGCTGCGGCTACGGCGGCGGCAGCGGTGGCTGCCGCTCAAGCGGCTGCCGCCGTTGTGAGACTGACAAGCAGCAATGGCATCAGGATTCGTGAAGAGTGGGCGGCCGTTAAGATCCAAGCCGCTTTTCGGGGTTGTTTGGCAAGGAGAGCACTGCGAGCACTAAAGGGGTTGGTGAAGCTCCAAGCACTGGTGAGAGGTCACATTGAGAGGAAGCGGACGGCAGCATGGCTGAAAAGAATGCAAGCACTCTTACAAGCATCACCACGAGCCAGTGCTGGGAGGACCCTGCAGACCTCATATTCAAGTGCAAAGTCATCTACGTGCCACCTTCATGTAAGTACGAGTCCAGCAACACCAGAAAAATTTGAGAGCCCTATCAGATCTAAGAGCATGAAATATGAGCAGTCACCGGTACTCAAGAGAAATGGCTCCAAATCCTGTGTCCTGGTAAATGGCAACCAAGACAAACGTGGGAACAGACCAGATGGTCAGGTAAATGAACAATCATGGAATCAAGGAAGATCATTGACCAGAGCTTATAGCACGAATGATGAAAAAAGCAATGGGATTCTTGAAATTGATTCCGGAAAACCACACTTCACATCAAAACGCAGAAACCTCTTTTACTCCACCAATCATGCTTTCAGTTTTGATCATTATTATAGTAATAGTTTGTCCACCACAAAGGAGTCAACATCTCTTCAATCTAGTCAAAGTCCATCTTGTGAAGTTCAGTCTTACAGCCCAACAAAAATCTACGAGGTTGAGGAGAGCCCATTCTACACTGCAGACAATAGTCCCCAATATTTATCTGCCACCTCAAAAGATGATGGCTCCAGAAGAAGCCCTTTTACTCCTACTAGGAGTGATGGCTCAAGGAGCTACCTTCGTGATTATTCTGACTACCCAAGTTACATGGCATACACTGAGTCTTCAAAGGCAAAGGCCAGATCTGTCAGTGCCCCAAAACAAAGGCCCCAATATGAGAGGTCCAGTTCCTCTAATAGGTACTCACATGACATGTCAAGATTGGCTTCACAAAGGACATCTGCATTGCATGCAGGCTTCACCAGCAAAGCCTATCCGGGTTCTGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGGTATAGATACTACTGA 1356 0.4757 MGKVSKWFRGLLGLRKSDCNSTLKPPKEKRRWSFVKSYREEEEEENNNHATANRADTLPQPEHVDNKHAMAVAAATAAAAVAAAQAAAAVVRLTSSNGIRIREEWAAVKIQAAFRGCLARRALRALKGLVKLQALVRGHIERKRTAAWLKRMQALLQASPRASAGRTLQTSYSSAKSSTCHLHVSTSPATPEKFESPIRSKSMKYEQSPVLKRNGSKSCVLVNGNQDKRGNRPDGQVNEQSWNQGRSLTRAYSTNDEKSNGILEIDSGKPHFTSKRRNLFYSTNHAFSFDHYYSNSLSTTKESTSLQSSQSPSCEVQSYSPTKIYEVEESPFYTADNSPQYLSATSKDDGSRRSPFTPTRSDGSRSYLRDYSDYPSYMAYTESSKAKARSVSAPKQRPQYERSSSSNRYSHDMSRLASQRTSALHAGFTSKAYPGSGRLDKLGMPVGYRYY* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04161 451 Pfam Protein of unknown function (DUF4005) 338 417 IPR025064 -
Rops2g04161 451 MobiDBLite consensus disorder prediction 223 245 - -
Rops2g04161 451 Gene3D - 101 157 - -
Rops2g04161 451 MobiDBLite consensus disorder prediction 182 209 - -
Rops2g04161 451 MobiDBLite consensus disorder prediction 335 368 - -
Rops2g04161 451 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Rops2g04161 451 MobiDBLite consensus disorder prediction 385 414 - -
Rops2g04161 451 PANTHER IQ-DOMAIN 5-RELATED 1 414 - -
Rops2g04161 451 MobiDBLite consensus disorder prediction 335 365 - -
Rops2g04161 451 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Rops2g04161 451 Coils Coil 35 55 - -
Rops2g04161 451 MobiDBLite consensus disorder prediction 41 61 - -
Rops2g04161 451 SMART iq_5 102 124 IPR000048 GO:0005515
Rops2g04161 451 SMART iq_5 125 146 IPR000048 GO:0005515
Rops2g04161 451 Pfam IQ calmodulin-binding motif 130 144 IPR000048 GO:0005515
Rops2g04161 451 Pfam IQ calmodulin-binding motif 105 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04161 Rops-Chr2 75786809 75791129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04161 1 450 IQD Protein Family AT4G23060 39.962 2.76e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04161 - - gmx:100793587 507.679