Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04159 ATGGCGACGACTAGGTCACCGAACCGTTCCTCGGAGGAGGCCGCTGATCCGATGCCGTTAATCGGAAGTTCCTCGGAAGAATCGAACTCCAGTCGGCGGTTCATCGGCGGGCCGAGTCTGCGGCAGGCGGCGCAGTTCCTGAGGCAGGCGAGTGGGCGGAGGTTGATGCGCGAGCCGTCGATGGTGGTGAGGGAGACGGCGGCGGAGCAATTGGAAGAGAGACAGAGCGATTGGGCTTATTCGAAGCCTGTTGTGGTTCTTGATATTGTCTGGAACTTCGCTTTCGTTGTTGCGGCTGCTACGGTTTTGCTTTTGAGTCGGAATGAGTCTCCAAGCACACCTCTAAGGTTGTGGATTTTAGGTTACGCTATGCAGTGTGTTCTTCACGTTGTATGCGTTTGCGTCGAGTATCGGAGGCGGAGACAGAGGCGGGAACAGTCGAACGTCAACGCCGTTGGGGTTGGGGGAAGTGGGGATTATAGCTCTGGTTCTTTGGATGGTTCTGGACACTATATGAATTTGGCGCAGTTCGACGATGATGGTACAAGTATGGCAAAGCATTTGGAATCAGCCAACACAATGTTTTCTTTTATTTGGTGGGTCATTGGATTCTATTGGGTATCGGCTGACGGTCAAGCTTTGGTCCAAGATTCTCCTCAGCTTTACTGGTTATGTATAGTCTTCCTGGGTTTTGATGTTTTCTTTGTCGTTTTCTGTATTGCACTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCGTGTATCATTGCACTTCTGTATGCAGTTGCAGACCAGGAAGGGGCATCAAAAGAAGACATTGAGCAGTTGTCAAAATTTAAATTCCAAAGAAAAAATAATGAGAAACTTGCTGGTAATACACAAGAACCTGTTGGAGGAGTAATGACTGAATGCCATGCTGATTCTCCAATTGAACATGTGCTTTCTGATGAGGATGCGGAATGTTGCATCTGCCTTTCTGCTTATGATGACGGGGTTGAACTAAGACAACTTCCTTGCGGTCACCATTTTCACTGTGCCTGCGTGGACAAATGGCTGTATATTAATGCTACTTGCCCCCTCTGCAAGTATAACATCTTGAAAAGTAGCAACCATGGTCAAGAGGAAGTGTAG 1137 0.4837 MATTRSPNRSSEEAADPMPLIGSSSEESNSSRRFIGGPSLRQAAQFLRQASGRRLMREPSMVVRETAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVAAATVLLLSRNESPSTPLRLWILGYAMQCVLHVVCVCVEYRRRRQRREQSNVNAVGVGGSGDYSSGSLDGSGHYMNLAQFDDDGTSMAKHLESANTMFSFIWWVIGFYWVSADGQALVQDSPQLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRKNNEKLAGNTQEPVGGVMTECHADSPIEHVLSDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSNHGQEEV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04159 378 MobiDBLite consensus disorder prediction 1 37 - -
Rops2g04159 378 CDD RING-H2_RNF6-like 322 364 - -
Rops2g04159 378 SUPERFAMILY RING/U-box 313 370 - -
Rops2g04159 378 Pfam Ring finger domain 322 364 IPR001841 -
Rops2g04159 378 ProSiteProfiles Zinc finger RING-type profile. 323 364 IPR001841 -
Rops2g04159 378 SMART ring_2 323 363 IPR001841 -
Rops2g04159 378 PANTHER TARGET OF ERK KINASE MPK-1 51 369 - -
Rops2g04159 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 377 IPR013083 -
Rops2g04159 378 MobiDBLite consensus disorder prediction 22 36 - -
Rops2g04159 378 FunFam E3 ubiquitin-protein ligase At1g12760 309 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04159 Rops-Chr2 75761146 75765771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04159 44 373 C3H Transcription Factor Family AT1G68070 50.751 2.27e-117 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04159 - - gmx:100779757 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04159 2 75761146 75765771 Rops1g02161 1 43106828 43113021 PCT