Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04152 ATGGCGTCGTTACAGCACACCACAGCTCCACTTCAATCCAAACTCATCCCCAGAAACATCCTCACCCAAAAACCCATTCTCAACCTCTCCCTCCCCAGCACCACCTTCACTTCCCGCAACCTGAACCTCACCGTCGGCGGCAGCGCCACCACCATCCGCCGCTCCAACGGCGCCCTCGGAGCCAGAATGTCAGCCACAGCCGCCGCCAGCTACGCCTCAGCCCTCGCTGACGTGGCCTACACCAACAACACCCTCGACGCGACCACCACCGACATCGAGAAAGTCGATGAAATCTTCTCCGACCCCAAGGTGTTCGACTTTTTCTCCAACCCGACCATCGAGATCGAGAAGAAGCGCAAGGTGGTAGACGACATTGCCACGTCATCAGAGCTTCAGCCCCACACCAAAAACTTCCTCTACATCTTGGTGGATGCGCAGAGGATCGACATCATCAGTGAGATAGTGAAGGAGTTTGAGATGGTTTATAACACGTTGACTGACACGGAGCTTGCGATTGTGACATCGGTGGTGAAGTTGGAATCGCAGCACTTGGCTCAGATTGCTAAGGAGGTGCAAAAGCTCACTGGGGCCAAGAATGTGAGGATTAAGACCGTGATTGACCCTTCTTTGGTGGCTGGTTTCACTGTCAGGTATGGGAGTTCTGGGTCTAAGTTGATTGACATGAGTGTTAAGAAGAAGCTAGAGGATATTGCTGCTCAGCTTGATCTTGCTGATATTAAACTCACTTTTATTGAGCTCGGAGGATCTGCTTTTCCCGATATTCTCAAAAACTTCCTAGCAGTCGTGGAATTTGTTTATATTTAG 825 0.5139 MASLQHTTAPLQSKLIPRNILTQKPILNLSLPSTTFTSRNLNLTVGGSATTIRRSNGALGARMSATAAASYASALADVAYTNNTLDATTTDIEKVDEIFSDPKVFDFFSNPTIEIEKKRKVVDDIATSSELQPHTKNFLYILVDAQRIDIISEIVKEFEMVYNTLTDTELAIVTSVVKLESQHLAQIAKEVQKLTGAKNVRIKTVIDPSLVAGFTVRYGSSGSKLIDMSVKKKLEDIAAQLDLADIKLTFIELGGSAFPDILKNFLAVVEFVYI* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04152 274 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 166 IPR026015 -
Rops2g04152 274 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 200 219 IPR020781 GO:0015986|GO:0016020|GO:0046933
Rops2g04152 274 Pfam ATP synthase delta (OSCP) subunit 68 241 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 PRINTS ATP synthase delta subunit signature 147 161 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 PRINTS ATP synthase delta subunit signature 136 147 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 PRINTS ATP synthase delta subunit signature 198 213 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 PRINTS ATP synthase delta subunit signature 67 86 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 Gene3D - 67 159 IPR026015 -
Rops2g04152 274 Hamap ATP synthase subunit delta [atpD]. 63 243 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 NCBIfam ATP synthase F1 subunit delta 68 241 IPR000711 GO:0015986|GO:0046933
Rops2g04152 274 PANTHER ATP SYNTHASE DELTA CHAIN 55 242 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04152 1 248 Primary Pumps ATPases AT4G09650 64.257 9.83e-104 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04152 K02113 - gmx:100815063 336.65