Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04150 ATGTCTGATGGTTATTCACAAGAGGAAATTGATTTGATTTCAAAAGCAATCACAGAATCCTATATTGTATACTTGGGATCACATTCTTTTGGTCCAAATCCTTCATCAATTGATGTTGAATCTGTCACGAACTCTCACCATGATCTACTCGGATCCTGCATTGGAAGTGCTGAGAGGGCCAAAGAAGCAATATTTTACTCTTATAATAGACATATTAATGGCTTTGCAGCAGTACTTGACGAAGAAGAAGCAGCGAAGGTTGCAAAGCATCCCAATGTAGTATCAGTTTTCTTAAACAAAGAAAGAAAACTGCACACTACACACTCATGGGATTTCCTTGGGTTGGAGAGAAATGGTGATATTCCAAAGGCTTCATTAGGGGGGAGGTCGTTTGGTGAAGATATCATTATTGGAAATTTAGACACTGGTGTTTGGCCTGAATCCAAGAGTTTCAGTGATGAAGGGCTGGGGCCAATCCCAAAAAAGTGGCGTGGAATCTGTCAGATTGATCCTAAGAATCAAAATAAATTTCACTGCAACAGGAAGCTTATTGGAGCCAGATATTTTTACAAAGGTTATGAGGCATCAACTGGCAAAAGACTAAATGCTTCGATGCTGAGTGCACGTGACTATAATGGTCATGGTTCACATACACTCTCAACTGCTGGAGGTAATTTTGTTCCTGGAGTTAATGTATTTGGCTATGGCAACGGAACAGCAAGCGGTGGATCACCAAAAGCCCGAGTTGCTGCCTATAAGGTGTGCTGGCCACCAATCCCGAAAAGTGAAGGTGGATGTACTGATGCAGACATTTTGGCTGGTTTTGAAGCAGCCATTGGTGATGGGGTTGATGTGCTTTCGGTGTCTCTGGGTGGAGATCAACCCTCAGAATATTTTCAAAGTGGTACTTCCATAGGATCTTTCCATGCAGTTGCCAACGGCATAATTGTAGTGAGTTCCGGAGGAAATTCAGGACCTTCTCCTTCAACTGTATCTAACTTGGAACCGTGGGTGCTCACAGTTGCTGCTAGCACAATTGATAGAGATTTCTCTAGTTATGTTACACTTGGTGACAAGAAAATCCTCAAGGGAGCAAGCGTTTCTGAGTCTGGCTTACCACCTCATAAGTTGTACCCATTGATCAGTGCTGCTGATGTCAAAGCCGACAATGCTTCTGCCGCCCTTCTATGCCAGAGTGGAGCTCTTGATCCAAAGAAGGCAAAGGGAAAAATACTGGTCTGTCTTCGTGGTGATAACGCTAGAGCTGACAAGGGTGTGCAAGCTGCTCGTGCAGGCGCTGTTGGAATGATTTTGGCTAATGATGAGGAATCAGGGAATGAAATTGTAGCTGACCCTCATGTACTTCCAGCATCAAATGTTAACTTTACGGATGGCAGTTACATTTTTAATTACATCAATCGCACCAAGTCTCCTGTGGCTTACATTTCTGAAGTGAGAACAGAATTGGGTATAAAGCCAGCTCCAGTTGTGGCTCCATTTTCATCAAGGGGCCCCAATGTCCTTGACCCAGCAATCCTCAAGCCTGACATCACCGCACCAGGAGTCAACATCATTGCTGCTTATAGTGAAGCCGCATCTCCAACAGAACAAGCATCTGATAAACGCAGAATTCCTTTCATTACCATGTCAGGCACTTCAATGTCCTGTCCTCATGTTTCTGGCATTGTTGGGCTGCTCAAAGCTCTTCATCCTGATTGGAGTCCAGCGGCTATTAAGTCAGCCATAATGACCACAGCAAGAACAAGAGATAACTCCAGAAGGCCTATTTCGGATTCATCACAGAACAAGGCAACTCCATTTGCCTATGGTAATATCATTACCCGGCTTTGA 1851 0.4392 MSDGYSQEEIDLISKAITESYIVYLGSHSFGPNPSSIDVESVTNSHHDLLGSCIGSAERAKEAIFYSYNRHINGFAAVLDEEEAAKVAKHPNVVSVFLNKERKLHTTHSWDFLGLERNGDIPKASLGGRSFGEDIIIGNLDTGVWPESKSFSDEGLGPIPKKWRGICQIDPKNQNKFHCNRKLIGARYFYKGYEASTGKRLNASMLSARDYNGHGSHTLSTAGGNFVPGVNVFGYGNGTASGGSPKARVAAYKVCWPPIPKSEGGCTDADILAGFEAAIGDGVDVLSVSLGGDQPSEYFQSGTSIGSFHAVANGIIVVSSGGNSGPSPSTVSNLEPWVLTVAASTIDRDFSSYVTLGDKKILKGASVSESGLPPHKLYPLISAADVKADNASAALLCQSGALDPKKAKGKILVCLRGDNARADKGVQAARAGAVGMILANDEESGNEIVADPHVLPASNVNFTDGSYIFNYINRTKSPVAYISEVRTELGIKPAPVVAPFSSRGPNVLDPAILKPDITAPGVNIIAAYSEAASPTEQASDKRRIPFITMSGTSMSCPHVSGIVGLLKALHPDWSPAAIKSAIMTTARTRDNSRRPISDSSQNKATPFAYGNIITRL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04150 616 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Rops2g04150 616 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Rops2g04150 616 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Rops2g04150 616 Gene3D - 347 489 - -
Rops2g04150 616 CDD Peptidases_S8_3 103 586 IPR034197 -
Rops2g04150 616 FunFam Subtilisin-like protease SBT1.5 134 360 - -
Rops2g04150 616 Pfam PA domain 397 466 IPR003137 -
Rops2g04150 616 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 8 105 IPR037045 -
Rops2g04150 616 Gene3D Peptidase S8/S53 domain 134 610 IPR036852 GO:0004252|GO:0006508
Rops2g04150 616 CDD PA_subtilisin_like 353 482 - -
Rops2g04150 616 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Rops2g04150 616 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 610 IPR045051 -
Rops2g04150 616 ProSiteProfiles Serine proteases, subtilase domain profile. 109 616 - -
Rops2g04150 616 FunFam subtilisin-like protease SBT1.5 347 489 - -
Rops2g04150 616 FunFam Subtilisin-like protease SBT5.3 11 105 - -
Rops2g04150 616 SUPERFAMILY PA domain 404 480 IPR046450 -
Rops2g04150 616 Pfam Subtilase family 132 598 IPR000209 GO:0006508|GO:0008236
Rops2g04150 616 SUPERFAMILY Subtilisin-like 104 598 IPR036852 GO:0004252|GO:0006508
Rops2g04150 616 Pfam Peptidase inhibitor I9 20 105 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04150 Rops-Chr2 75574095 75579198 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04150 16 611 Subtilisin-like Serine Gene Family AT5G59810 63.940 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04150 - - vun:114175516 837.025