Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04149 ATGATCAGTAAGAAACAAATATTGAAAATCAGTAAGTTTCTTCTAGAAGCTGCAGCAAAGGTTGGTATAGAAGGGGCAGAAGAGTTTCTTGAGAACCCCAACAATGGGCTTAAGGAGGTGGAGGATGAGCTCAAAACAAACTCAGGAAACATTACAGGGGTTCCATACTACGAGTCCTATATTGTATACTTGGGATCACATTCTTTTGGTCCAAATCCTTCATCAATTGATGTTGAATCTGTCACTAACTCTCACCATGATCTACTCGGATCCTGCATTGGAAGCGCTGAGAGGGCCAAAGAAGCAATATTTTACTCTTATAATAGACATATTAATGGCTTTGCAGCAGTACTTGATGAAGACGAAGCAGCGGAGGTTGCAAAGCATCCCAATGTAGTATCAGTTTTCTTAAACAAAGAAAGAAAACTGCACACTACACACTCATGGGATTTCCTTGGGTTGGAGAGAAATGGTGAAATTCCAAAGGCTTCATTAGGGGGGAGGTCGTTTGGTGAAGATATCATTATCGGAAATTTAGACACTGGTGTTTGGCCTGAATCCGAAAGTTTCAGTGATGAAGGGCTTGCGCCAATCCCAAAAAATTGGCGTGGAATCTGTCAAACAGATTATTTGAATGAAGCTAAATTTAACTGCAACAGGAAGCTTATTGGAGCCAGATATTTTAATAAAGGTTATGAGGCATCTATTGGCAAAAGACTAAATGCTTCGATGCTGAGTGCACGTGACTATGAAGGTCATGGATCACATACTTTATCAACTGCTGGAGGTAATTTTGTTCCAGGAGCTAATGTATTTGGCCATGGCAACGGAACAGCAAGCGGTGGATCACCAAAAGCCCGTGTTGCAGCCTATAAGGTGTGCTGGCCACCAGTCTTGCAAAGTGAAGGTGGATGTTTTGATGCAGACATTTTGGCTGGTTTTGATGCAGCCATCGGTGATGGGGTTGATGTGCTTTCGGTGTCTTTGGGTTCAGATCAACCCCAGGAATATTTTCAAAGTGGTACTTCCATAGGATCATTCCATGCAGTTGCCAACGGCATAATTGTAGTGAGTTCCGGAGGAAATTCAGGACCTTCTCCTTCAACTGTATCTAACTTGGAACCGTGGGTGCTCACAGTTGCTGCTAGCACAATTGATAGAGATTTCTCTAGTTATGTTACACTTGGTGACAAGAAAATCCTCAAGGGAGCAAGCGTTTCTGAGTCTGGCTTACCACCTCATAAGTTGTACCCATTGATCAGTGCTGCTGATGTCAAAGCCGACAATGCTTCTGCCGCCCTTCTATGCCAGAGTGGAGCTCTTGATCCAAAGAAGGCAAAGGGAAAAATACTGGTCTGTCTTCGTGGTGATAACGCTAGAGCTGACAAGGGTGTGCAAGCTGCTCGTGCAGGCGCTGTTGGAATGATTTTGGCTAATGATGAGGAATCAGGGAATGAAATTGTAGCTGACCCTCATGTACTTCCAGCATCAAATGTTAACTTTACGGATGGCAGTTACATTTTTAATTACATCAATCGCACCAAGTCTCCTGTGGCTTACATTTCTGAAGTGAGAACAGAATTGGGTATAAAGCCAGCTCCAGTTGTGGCTCCATTTTCATCAAGGGGCCCCAATGTCCTTGACCCAGCAATCCTCAAGCCTGACATCACCGCACCAGGAGTCAACATCATTGCTGCTTATAGTGAAGCCGCATCTCCAACAGAACAAGCATCTGATAAACGCAGAATTCCTTTCATTACCATGTCAGGCACTTCAATGTCCTGTCCTCATGTTTCTGGCATTGTTGGGCTGCTCAAAGCTCTTCATCCTGATTGGAGTCCAGCGGCTATTAAGTCAGCCATAATGACCACAGCAAGAACAAGAGATAACTCCAGAAGGCCTATTTCGGATTCATCACAGAACAAGGCAACTCCATTTGCCTATGGTGCAGGGCACATTCGACCAAATCGTGCCGCGGACCCTGGACTTGTCGCTGAGAGGGCCAAAGAAGCAATATTTTACTCTTATAATAGACACATTAATGGCTTTGCAGCAGTACTTGATGAAGACGAAGCAACGGAGGTTGCAAAGCATCCCAATGTAGTATCAGTTTTCTTAAACAAACAAAAAAAACTGCACACTACACACTCATGGGATTTCCTTGGGTTGGAGAGAAATGGTGAAATTCCAAAGGCTTCATTAGGGGGGAGGTCGTTTGGTGAAGATATCATTATCGGAAATTTAGACACTGGTTTTGTATTTTCCAAAGCCTTTAAGATCTCTACTGGGTTGATGTCTTGCAATTTGCTAGGATGTAGCTCTATTGGTCTTCTCTGTCTGGAGTTTTTGGTTTATTGTTGCACAAAAGCATTCTATTTATCATATTATTATGGTAGAATGTCCGAGGCTGGGAGCAAAAGTGTTGAGATAAGGTACTTTGCTGGTTAG 2448 0.4338 MISKKQILKISKFLLEAAAKVGIEGAEEFLENPNNGLKEVEDELKTNSGNITGVPYYESYIVYLGSHSFGPNPSSIDVESVTNSHHDLLGSCIGSAERAKEAIFYSYNRHINGFAAVLDEDEAAEVAKHPNVVSVFLNKERKLHTTHSWDFLGLERNGEIPKASLGGRSFGEDIIIGNLDTGVWPESESFSDEGLAPIPKNWRGICQTDYLNEAKFNCNRKLIGARYFNKGYEASIGKRLNASMLSARDYEGHGSHTLSTAGGNFVPGANVFGHGNGTASGGSPKARVAAYKVCWPPVLQSEGGCFDADILAGFDAAIGDGVDVLSVSLGSDQPQEYFQSGTSIGSFHAVANGIIVVSSGGNSGPSPSTVSNLEPWVLTVAASTIDRDFSSYVTLGDKKILKGASVSESGLPPHKLYPLISAADVKADNASAALLCQSGALDPKKAKGKILVCLRGDNARADKGVQAARAGAVGMILANDEESGNEIVADPHVLPASNVNFTDGSYIFNYINRTKSPVAYISEVRTELGIKPAPVVAPFSSRGPNVLDPAILKPDITAPGVNIIAAYSEAASPTEQASDKRRIPFITMSGTSMSCPHVSGIVGLLKALHPDWSPAAIKSAIMTTARTRDNSRRPISDSSQNKATPFAYGAGHIRPNRAADPGLVAERAKEAIFYSYNRHINGFAAVLDEDEATEVAKHPNVVSVFLNKQKKLHTTHSWDFLGLERNGEIPKASLGGRSFGEDIIIGNLDTGFVFSKAFKISTGLMSCNLLGCSSIGLLCLEFLVYCCTKAFYLSYYYGRMSEAGSKSVEIRYFAG* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04149 815 SUPERFAMILY Subtilisin-like 143 663 IPR036852 GO:0004252|GO:0006508
Rops2g04149 815 Pfam Peptidase inhibitor I9 666 713 IPR010259 -
Rops2g04149 815 Pfam Peptidase inhibitor I9 59 144 IPR010259 -
Rops2g04149 815 FunFam Subtilisin-like protease SBT5.3 54 144 - -
Rops2g04149 815 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 55 144 IPR037045 -
Rops2g04149 815 Pfam PA domain 436 505 IPR003137 -
Rops2g04149 815 CDD Peptidases_S8_3 142 625 IPR034197 -
Rops2g04149 815 ProSitePatterns Serine proteases, subtilase family, serine active site. 590 600 IPR023828 -
Rops2g04149 815 FunFam Subtilisin-like protease SBT1.5 173 399 - -
Rops2g04149 815 Gene3D Peptidase S8/S53 domain 173 667 IPR036852 GO:0004252|GO:0006508
Rops2g04149 815 Gene3D - 386 528 - -
Rops2g04149 815 ProSiteProfiles Serine proteases, subtilase domain profile. 148 659 - -
Rops2g04149 815 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 671 759 IPR045051 -
Rops2g04149 815 Pfam Subtilase family 171 651 IPR000209 GO:0006508|GO:0008236
Rops2g04149 815 CDD PA_subtilisin_like 392 521 - -
Rops2g04149 815 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Rops2g04149 815 PRINTS Subtilisin serine protease family (S8) signature 589 605 IPR015500 -
Rops2g04149 815 PRINTS Subtilisin serine protease family (S8) signature 249 262 IPR015500 -
Rops2g04149 815 SUPERFAMILY PA domain 443 518 IPR046450 -
Rops2g04149 815 FunFam subtilisin-like protease SBT1.5 386 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04149 Rops-Chr2 75519531 75539864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04149 666 751 Subtilisin-like Serine Gene Family AT5G59810 68.966 6.78e-31 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04149 - - vun:114175516 861.292