Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04143 ATGTCTGATGGTTATTCACAAGAGGAAATTGATTTGATTTCAAATGCAGTCACAGAATCCTATATTGTATACTTGGGATCACATTCTTTTGGTCCAAATCCTTCACCAATTGATGTTGAATCTGTCACGAACTCTCACCATGATCTACTCGGATCTTGCATTGGAAGCGCTGAGAGGGCCAAAGAAGCAATATTTTACTCTTATAATAAACATATTAATGGCTTTGCAGCAGTACTTGATGAAGACGAAGCAGCAGAGGTTGCAAAGCATCCCAATGTAGTATCAGTTTTCTTAAACAAAGAAAGAAAACTGCACACTACACACTCATGGGATTTCCTTGGGTTGGAGAGAAATGGTGATATTCCAAAGGCTTCATCAGGGGGGAGGTCGTTTGGTGAAGATATCATTATCGGAAATTTAGACACTGGTGTTTGGCCTGAATCCAAGAGTTTCAGTGATGAAGGGCTGGGGCCAATCCCAAAAAAGTGGCGTGGAATCTGTCAGATTGATCCTAAGAATCAAGATAAATTACACTGCAACAGGAAGCTTATTGGAGCCAGATATTTTTACAAAGGTTATGAGGCATCAACTGGAAAAAGACTAAATGCTTCGATGCTGAGTGCACGTGACTATAATGGTCATGGTTCACATACTCTCTCAACTGCTGGAGGTAATTTTGTTCCTGGAGTTAATGTATTTGGCCATGGCAACGGAACAGCAAGCGGTGGATCACCAAAAGCCCGAGTTGCAGCCTATAAGGTGTGCTGGCCAAGAGTCCCTAAAAGAAAAGGTGGATGTACTGATGCAGACATTTTGGCTGGTTTTGATGCTGCCATTGGTGATGGGGTTGATGTGCTTTCAGTGTCTTTGGTTTCACATCAACTCCACGAATATTTTCAAAGTGGTACTTCCATAGGATCCTTCCATGCAGTTGCCAACGACATAATTGTAGTGACTTCCGGAGGAAATTCAGGACCTTCTCCTTCAACTGTATCCAACTTGGAACCGTGGGTGCTCACAGTTGCTGCTAGCACAATTGATAGAGATTTCTCTAGTTATGTTACACTTGGTGACAAGAAAATCCTCAAGGGAGCAAGCGTTTCTGAGTCTGGCTTACCACCTCATAAGTTGTACCCATTGATCAGTGCTGCTGATGTCAAAGCTGACAATGCTTCTGCCGCAGATGCCCTTCTATGCCAGAGTGGAGCTCTTGATCCAAAGAAGGCAAAGGGAAAAATACTGGTCTGTCTTCGTGGTGATAACACTAGAGCTGACAAGGGTGTGCAAGCTGCTCGTGTAGGCGCTGTTGGAATGATTTTGGCTAATGATGAGGAATCAGGGAATGGAATTGTAGCTGACCCTCATGTACTTCCAGCTTCAAATGTTAACTTTACGGATGGCAGTTACATTTTTAATTACATTAACCGCACCAAGTCTCCTGTGGCTTACATTTCTGAAGTGAGAACAGAATTGGGTATAAAGCCAGCTCCAGTTGTGGCTTCATTTTCATCAAGGGGCCCCAATGTCCTTGACCCAGCAATCCTCAAGCCTGACATCACTGCACCAGGAGTCAACATCATTGCTGCTAATTGTGAAGCCATATCTCCAACAGAACAAGCATCTGAAAAACGCATAATTCCTTTCATTACCATGTCAGGCACTTCAATGTCCTGTCCTCACGTTTCTGGCATTGTTGGGCTGCTCAAAGCTCTTCATCCTGATTGGAGTGCAGCTGCTATTAAGTCAGCCATAATGACCACAGGTAAAGTTCATTGCTTGCTTACACACCTTTAA 1794 0.4342 MSDGYSQEEIDLISNAVTESYIVYLGSHSFGPNPSPIDVESVTNSHHDLLGSCIGSAERAKEAIFYSYNKHINGFAAVLDEDEAAEVAKHPNVVSVFLNKERKLHTTHSWDFLGLERNGDIPKASSGGRSFGEDIIIGNLDTGVWPESKSFSDEGLGPIPKKWRGICQIDPKNQDKLHCNRKLIGARYFYKGYEASTGKRLNASMLSARDYNGHGSHTLSTAGGNFVPGVNVFGHGNGTASGGSPKARVAAYKVCWPRVPKRKGGCTDADILAGFDAAIGDGVDVLSVSLVSHQLHEYFQSGTSIGSFHAVANDIIVVTSGGNSGPSPSTVSNLEPWVLTVAASTIDRDFSSYVTLGDKKILKGASVSESGLPPHKLYPLISAADVKADNASAADALLCQSGALDPKKAKGKILVCLRGDNTRADKGVQAARVGAVGMILANDEESGNGIVADPHVLPASNVNFTDGSYIFNYINRTKSPVAYISEVRTELGIKPAPVVASFSSRGPNVLDPAILKPDITAPGVNIIAANCEAISPTEQASEKRIIPFITMSGTSMSCPHVSGIVGLLKALHPDWSAAAIKSAIMTTGKVHCLLTHL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04143 597 FunFam Subtilisin-like protease SBT1.5 134 360 - -
Rops2g04143 597 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 589 IPR045051 -
Rops2g04143 597 FunFam subtilisin-like protease SBT1.5 347 491 - -
Rops2g04143 597 ProSitePatterns Serine proteases, subtilase family, serine active site. 553 563 IPR023828 -
Rops2g04143 597 FunFam Subtilisin-like protease SBT5.3 11 105 - -
Rops2g04143 597 Gene3D - 347 491 - -
Rops2g04143 597 CDD PA_subtilisin_like 353 484 - -
Rops2g04143 597 Gene3D Peptidase S8/S53 domain 134 589 IPR036852 GO:0004252|GO:0006508
Rops2g04143 597 PRINTS Subtilisin serine protease family (S8) signature 552 568 IPR015500 -
Rops2g04143 597 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Rops2g04143 597 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Rops2g04143 597 CDD Peptidases_S8_3 103 587 IPR034197 -
Rops2g04143 597 ProSiteProfiles Serine proteases, subtilase domain profile. 109 597 - -
Rops2g04143 597 Pfam Subtilase family 132 588 IPR000209 GO:0006508|GO:0008236
Rops2g04143 597 SUPERFAMILY PA domain 404 481 IPR046450 -
Rops2g04143 597 SUPERFAMILY Subtilisin-like 104 588 IPR036852 GO:0004252|GO:0006508
Rops2g04143 597 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 105 IPR037045 -
Rops2g04143 597 Pfam Peptidase inhibitor I9 20 105 IPR010259 -
Rops2g04143 597 Pfam PA domain 396 468 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04143 Rops-Chr2 75384261 75390209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04143 16 590 Subtilisin-like Serine Gene Family AT5G59810 61.979 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04143 - - vun:114175516 779.63