LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g04142	ATGCATGGGGAAAAGCTTCTTCAATCTAATGTTGAATCGTCAGGCCAAGCTCAAAAAGAAACAATTAGACAATATCCAATGCAAGATATGTTAAATGATGTTTTTGGTGCCCTTATGGATGATGGTTGTGATGATTCTGATCCATCAAATCTTCCTAACAATGACCACTCTATGGGTGTTTGGCCTGAATCCAAGAGTTTCAGTGATGAAGGGTTGGGGCCAATCCCCAAAAAGTGGCACGGAATCTGTCAAATTGATCCTAAGGATCAAGATAATTTTCACTGCAACAGCTCCAGTTGTGGCTCCATTTTCATCAAGGGCCCCAATGTCCTTGAGCCAGTAATCCTCAAGCCTTACATCAACGCACCAAGAGTCAACATCATTGCTGCTTATAGTGAAACCGAATCTCCAACACAACAAGCATCTGATAAACGCAAAATTCCTTTCATTACTATGTCAGGCACTTCAATGGCATGTCCTCATGTTTCTGGCCTTGCATGGGCGCTCAAATCACTTCGTCCTGATTGGAGTCCAACTGCTATTAAGTCAGCAATAATGACCACAGCAAGAACAAGAGATAACTCCAGAAGGCCTATTTTGGATTTATCACTGAACAAGGCAACTCAATTTGCCTATGGTGCGGGGCACGTTTGA	654	0.4266	MHGEKLLQSNVESSGQAQKETIRQYPMQDMLNDVFGALMDDGCDDSDPSNLPNNDHSMGVWPESKSFSDEGLGPIPKKWHGICQIDPKDQDNFHCNSSSCGSIFIKGPNVLEPVILKPYINAPRVNIIAAYSETESPTQQASDKRKIPFITMSGTSMACPHVSGLAWALKSLRPDWSPTAIKSAIMTTARTRDNSRRPILDLSLNKATQFAYGAGHV*	218

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g04142	217	Gene3D	Peptidase S8/S53 domain	59	99	IPR036852	GO:0004252\|GO:0006508
	Rops2g04142	217	Gene3D	Peptidase S8/S53 domain	106	217	IPR036852	GO:0004252\|GO:0006508
	Rops2g04142	217	ProSiteProfiles	Serine proteases, subtilase domain profile.	1	217	-	-
	Rops2g04142	217	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	59	101	IPR045051	-
	Rops2g04142	217	Pfam	Subtilase family	109	215	IPR000209	GO:0006508\|GO:0008236
	Rops2g04142	217	ProSitePatterns	Serine proteases, subtilase family, serine active site.	154	164	IPR023828	-
	Rops2g04142	217	SUPERFAMILY	Subtilisin-like	90	217	IPR036852	GO:0004252\|GO:0006508

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g04142	Rops-Chr2	75326162	75337352	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g04142	59	86	Subtilisin-like Serine Gene Family	AT5G59810	67.857	1.79e-07	49.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g04142	-		-	palz:118037706	189.889

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