Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04135 ATGGCCACCACCACCACCACCAGTCTCGGCGCCGGCGCCGGTGGAGATGACCGTGTTCTCGCGACGGCTCAGCAGATCTTGAAGAGCCTAAAAGCTCCGAAAGAGGATCGAGAAGACATGCTTTTGATCTTCTCCACCTTCGATAACCGCCTCTCCGGTATCACGGACCTCATCAACGGCGAGGATTCAAAGTCTTCCTCTGATGAAGAACGCGACCGTTTCGAAGCCGCCGAGAAAGTCATCCTAGTCGACGCTTCCCACTCCGGCGAACCTTCTCGCCAATCCACCTCGCTCTTCGATCCTCCAAACGACCCCGTCGAGTACTTATCCGCCGTCGACGAGATCATCCAGTGGATGGAACAATTCTCTATCGCGCCGCTGTCCTCCGCCACCAGCCAAATCATCGTCGACCGCGCTGAAAACGCGATCCAGCTCGCGATGTCGAGGCTCGAGGACGAGTTGCGCCACGTTTTGATTTGCAACACCATCCCACCCGACGCCGTGAGCCGGTCCGGTTCGAACCGTAGGGTTTCCCTCTCATTCGGTTCTCACGACGGCGCGATCTACGAGAATCTAGAAAGCTTCGGCGATGTCAGCGATCGCAGTTCTCATCAGTTTCACTCTCGCGGTGCGAGCTTGGGAGACGATTTCCCCGTCGATTTGGTTCGTCCCGAAGCGGTGATGAACCTCAGAGATATCATCGATCGTATGGTTAGGTCTGGTTATGAAAGGGAGTGCCTTCAGGTTTATAGCAGTGTCCGTCGTGATGCTTTGGATGAGTGTTTGGTTATTCTTGGTGTTGAGAAGCTTAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAAGAGTTTGGATGAGAAGATGAAAAATTGGGTGCAAGCGGTTAAGGTTGTTGTTGGTGTTCTGTTGAGTGGGGAAAAGAGGCTTTGTGATAGTCTTTTTGGTGAATTGGATGAATTGAAGGAGATATGTTTCAATGAGACTGCTAAAGGGTGTGTTATGCAGTTGTTGAATTTTGGTGAGGCTATTGCAATTTGTAAGAGGTCACCTGAGAAATTGTTTAGGATATTGGATATGTATGAGGTTTTGAGGGATGCCTTGCCTGATTTGGAGGATATGGTTTCGGATGAATTTGTGATCACTGAGGCCAAGGGAGTGTTGACTGGACTTGGTGAGGCTGCTAAAGGAACATTTGCTGAGTTTGAGAATTGTATTCGGAATGAGACTTCCAAGAAGCCAGTCATCACTGGGGATGTTCATCCTTTGCCTCGTTATGTCACAAATTATCTCAAGTTGCTTGTTGATTATGGTGCTCCTATGGATTCACTTTTGGAAATCAGTGATGAGGATATTTATCGTTTCCAAAATGATTTTGGTGGTGATGGATCACAATTAGAGGCCATGTCCCCCTTAGGACGTCAAATACTGTTGCTGATGTCTGAGCTTGAGTACAATCTTGAGGAAAAATCGAGACTTTATGAAGACAGTGCAATGCAGCAGATATTTTTGATGAACAATCTCTACTACCTGGTGCGGAAAGTGAAAGACTCAGATCTTAGGAAGGTGTTGGGAGATGATTGGATTCGTAAACGCCGTGGTCAGATACGCCAGTATGCAACTGGCTATCTTAGAGCTTCTTGGAGCAAGGCTTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCACTAGTAATGCTTCAAAGATGGCTTTGAAAGAGAGGTTCAAGAGTTTCAATGCATGTTTTGAAGAAATATACAGGGTTCAGACAGCTTGGAAGGTACCAGATGATCAGCTTCGGGAGGAGCTGCGAATATCTGTATCAGAGAAGGTGATTCCTGCATACCGCTCATTTGTGGGGAGGTTTAGGAGTCAGCTAGAGGGAAGGCATGCAGGGAAATACATTAAGTATACACCAGAGGATCTAGAGACCTATTTATTAGATTTATTTGAAGGATCCCCTGCTGTTTTGCATCACATAAGGAGAAAGAGTACATAA 1995 0.4742 MATTTTTSLGAGAGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGEDSKSSSDEERDRFEAAEKVILVDASHSGEPSRQSTSLFDPPNDPVEYLSAVDEIIQWMEQFSIAPLSSATSQIIVDRAENAIQLAMSRLEDELRHVLICNTIPPDAVSRSGSNRRVSLSFGSHDGAIYENLESFGDVSDRSSHQFHSRGASLGDDFPVDLVRPEAVMNLRDIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVEKLSIEEVQRVEWKSLDEKMKNWVQAVKVVVGVLLSGEKRLCDSLFGELDELKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFRILDMYEVLRDALPDLEDMVSDEFVITEAKGVLTGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVTNYLKLLVDYGAPMDSLLEISDEDIYRFQNDFGGDGSQLEAMSPLGRQILLLMSELEYNLEEKSRLYEDSAMQQIFLMNNLYYLVRKVKDSDLRKVLGDDWIRKRRGQIRQYATGYLRASWSKALSCLKDEGIGGSTSNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISVSEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04135 664 Gene3D Exocyst complex component Exo70 92 656 - -
Rops2g04135 664 SUPERFAMILY Cullin repeat-like 100 650 IPR016159 -
Rops2g04135 664 Coils Coil 136 156 - -
Rops2g04135 664 Pfam Exo70 exocyst complex subunit 288 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops2g04135 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 65 651 IPR004140 GO:0000145|GO:0006887
Rops2g04135 664 FunFam Exocyst subunit Exo70 family protein 92 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04135 Rops-Chr2 75063114 75065699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04135 17 663 EXO70 exocyst subunit family AT5G50380 60.059 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04135 K07195 - gmx:100818693 1115.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04135 2 75063114 75065699 Rops2g04135 2 75063114 75065699 ECH
Rops10g00862 10 19584494 19588984 Rops2g04135 2 75063114 75065699 PCT