Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04110 ATGTCGAAAACCCTTGGGTCCTCACTCTCCAGTCGGCAACCCTCACTCGAATCGAATCAATCATACAAAAGAAAACGCGTCAACGAAAGACTCCCAAGGCGGCTTCTCTCTTCTCTTTCTTGTGCGTCGTTCTCCTTCGGTTTCTTCGTCGCCGGGCGTAAGAGTGTTTTGCTGAGGAGGGAATCCTACAAATATGGTTGTTCCCTTAAGGAATCTGATCACTATAAGAATGTTTCTTCCGTCGTGGAAGTGGAAGGGTTACTTGGTGGAAAAGAGGAGAGAGAGCAAGGTGAGATTGTTGAACATGGGGAATATACACATGCCCCAGGGTTTCAAGCGGGTGATGGGCACAAAGCTTTGCCACCGCCAGAGAAGAAAAGAAAATTCTCTCCAATTCTTTGGGACCTGGCGGAGAAGGAAGCAAGAATCTCTTCAAAAAGTAGGGTCACGCAGGTGACCGCCGTGTCACCATCTCCTCCATCTGGAGCCAATGGTGTTTTAAGGACGTCTTCACCTAATTCCTCTTATGTGCTGCCTCAAGACCGTTTGCAGAACTATAACCAAGATGTGGATGAAGATGACGACGTGAAACGATGGAACATCACAATGTCAAGGTGGGCTTCTGATGGTCTTTCACCAATGGATGCTGATGATAAATGCAAGCAAGCCAAAGGAAGCTCGAGTCCTGAAGCTGGTGAATACCTAAGTGAATGTTCGGAGAGCACAATCACTCGATCGACAGGAAGCTTTGGAGGAGATCATGGTGAAAGAGATCTTGATCTGGGCCCTTCTACTGGTGATACTGATTTTGAAAAGGAGTTCTCTATGGACTCCATGGATGATGTTGAGGAACAAGGTAATGTTAGTGATTCTCCATCAGATTCTCATGGTTTAACACATGGGCAGAGAAATATAAACATGCTTCAGAGTTGCAGAAGTGTGTGTGAGTTTGAGATGATTAAGAAAATAAACGAAGGAACTTATGGTGTTGTCTATAAAGCTAAGGATAAGAAGACTGGAGAAGTACTAGCATTAAAGAAGGTGAAAATGAACATTGAGAGGGATGGCTTTCCGTTGTCATCTTTGAGGGAAATGAACATTCTGTTATCTTTTAATCATCCCTCTATTGTGGATGTTAAAGAAGTAGTTGTCGATGACTATGATGGCACTTTTATGGTAATGGAATACATGGAGCATGACCTTAAAGGACTGATGGAGGTAAAGAAGCAGCCTTTTAGTATAGGTGAAATAAAATACTTGATGCTTCAACTTCTTGAAGGTGTCAAGTATCTCCATGATAATTGGGTTCTCCATAGGGATTTGAAGTCATCAAATATTCTGCTGAACAATGAAGGGGAGCTGAAAATATGTGACTTTGGGTTGTCAAGGCAGTATGGAAGCCCGCTGAAGCCATATACTCCTGTTGTGGTTACACTATGGTACCGAGCACCTGAACTTTTGTTAGGCGCTAAAGAATATTCAACAGCAATTGACATGTGGTCGGTGGGTTGCATAATGGCTGAATTAGTTGCCAAGGAGCCTCTGTTCAGGGGTAAAACTGAACTTGAACAACTTGATAAGATTTTTCGAACCTTGGGTACACCAGATGAGAAAATTTGGCCAGGATTATCCAAATTACCAGGGTCGAAAGCGAAATTTGTTAAGCAACCCTATAATATGCTAAGAAAGAAGTTTCCAGCCACATCTTTCACTGGTTCACCAGTTTTATCTGAGTTGGGATTTGACTTGTTGAAGAAGCTTCTAACTTATGACCCTGAAGAGAGGATAACAGCAGAAGATGCTCTCCTTCATGATTGGTTCCATGAAGCCCCCCTTCCCAAATCTGATTTCAAGCCTATTTTTCCTTATTGGCGGTGCTAG 1881 0.4317 MSKTLGSSLSSRQPSLESNQSYKRKRVNERLPRRLLSSLSCASFSFGFFVAGRKSVLLRRESYKYGCSLKESDHYKNVSSVVEVEGLLGGKEEREQGEIVEHGEYTHAPGFQAGDGHKALPPPEKKRKFSPILWDLAEKEARISSKSRVTQVTAVSPSPPSGANGVLRTSSPNSSYVLPQDRLQNYNQDVDEDDDVKRWNITMSRWASDGLSPMDADDKCKQAKGSSSPEAGEYLSECSESTITRSTGSFGGDHGERDLDLGPSTGDTDFEKEFSMDSMDDVEEQGNVSDSPSDSHGLTHGQRNINMLQSCRSVCEFEMIKKINEGTYGVVYKAKDKKTGEVLALKKVKMNIERDGFPLSSLREMNILLSFNHPSIVDVKEVVVDDYDGTFMVMEYMEHDLKGLMEVKKQPFSIGEIKYLMLQLLEGVKYLHDNWVLHRDLKSSNILLNNEGELKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELVAKEPLFRGKTELEQLDKIFRTLGTPDEKIWPGLSKLPGSKAKFVKQPYNMLRKKFPATSFTGSPVLSELGFDLLKKLLTYDPEERITAEDALLHDWFHEAPLPKSDFKPIFPYWRC* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04110 626 MobiDBLite consensus disorder prediction 251 275 - -
Rops2g04110 626 Gene3D Phosphorylase Kinase; domain 1 304 398 - -
Rops2g04110 626 MobiDBLite consensus disorder prediction 210 301 - -
Rops2g04110 626 CDD STKc_CDC2L1 311 607 IPR045267 GO:0004674|GO:0005524|GO:0006468
Rops2g04110 626 FunFam cyclin-dependent kinase G-2 isoform X1 302 398 - -
Rops2g04110 626 PANTHER CELL DIVISION PROTEIN KINASE 316 613 - -
Rops2g04110 626 MobiDBLite consensus disorder prediction 148 178 - -
Rops2g04110 626 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g04110 626 SUPERFAMILY Protein kinase-like (PK-like) 311 612 IPR011009 -
Rops2g04110 626 FunFam Cyclin-dependent kinase G-2 399 625 - -
Rops2g04110 626 MobiDBLite consensus disorder prediction 232 249 - -
Rops2g04110 626 MobiDBLite consensus disorder prediction 285 301 - -
Rops2g04110 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Rops2g04110 626 MobiDBLite consensus disorder prediction 1 24 - -
Rops2g04110 626 Pfam Protein kinase domain 317 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04110 626 SMART serkin_6 317 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g04110 626 Gene3D Transferase(Phosphotransferase) domain 1 399 618 - -
Rops2g04110 626 ProSiteProfiles Protein kinase domain profile. 317 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04110 Rops-Chr2 74783309 74790897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04110 312 613 Core Cell Cycle Gene Families AT5G10270 46.855 1.57e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Rops2g04110 Pkinase 1.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04110 K08818 - gmx:100788840 766.533