Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04103 ATGTCCCCTTCACTTTATAGTGCCTTCAAGGATGAGGTGCATGATGAAAATCCCATAACTGGTCTTGATCTCTGGCCAAAGGGTTGCTATGGATATCCTCATCTACCTATTTTGGATAGCAGTGCTTCTACTTGGATCCTTCCCTTTTCTGATGAAACCATCAGGGATAGCAAGAGGGTGAAGATAATTGGAGGTAGCAATTTCTATAGCTGCCTCAACAGCAGCAGAAGCAACAACAGTGTGAATAGCATGTCAATGCTCCATTTCAGAGATCACATAAGGAGATATCTTGATGCTGAAGCTGTTGAAGAGGTAGCAGAAGATATGAACAATTCTGAAGGTGGTGGAGCTGAAGAAGATGGAAGTGCTGAGGAAATAAGGCTTGTTCAACTTCTAATTGCTTGTGCTGAAGCTGTGGCATGTCGTGACAAATCACATGCTTCAATATTATTATCTGAACTTAAAGCCAATGCATTGGTATTTGGGTCTTCATTCCAAAGAGTTGCATCTTGTTTTGTCCAAGGCCTGACTGAGAGGCTCACTTTGTTTCAACCATTGGGGCCAGTGGGAGTTACACAATCCATGATGAACATTATGGATGCAGCCTCAGAAGAAATGGAAGAAGCTTTCAGGTTGGTTTATGAGATCTGCCCACATATTAAATTTGGACACTTTGTGGCTAATTCCACGATATTGGAAGCCTTTGAGGGTGAGAGTTTTGTTCATGTGGTTGACCTTGGCATGAGCCTTGGTCTTCCTCATGGCCACCAATGGCGGGGACTTATTCAAAGCCTTGCTACCCGTGCTGGAAACCGTGTTCGACGGCTTCGAATCACAGGGGTTGGACTTTGCATTGCTAGACTCCAGATCATTGGTGAAGAACTCTCAGTTTATGCAAATAATTTGGGTATTAATTTTGAGTTCTCGGTGGTGCAGAAGAATTTGGAAAATTTGAAACCTGAAGACATAGAAGTGAATGAGGAAGAGGCTCTGGTGGTTAACAGCATTCTTCAGCTGCATTGTGTGGTTAAAGAAAGTCGTGGTGCTTTGAATTCAGTCCTTCAGATGATTCATGGTCTTTCACCAAAAGTCTTGGTCATGGTGGAGCAGGACTCAAGTCACAATGGACCCTTTTTTCTTGGGAGGTTTATGGACTCATTGCATTATTACTCAGCTATTTTTGACTCCTTGGATGCCATGTTGCCAAAGTATGATACTAAGAGGGCCAAAATGGAGCAATTTTATTTTGCTGAGGAGATAAAGAACATTGTGAGTTGTGAGGGGCCATTAAGGATGGAGAGGCATGAGAGAGTTGACCAGTGGCGTAGAAGGATGAGCAGGGCTGGGTTTCAAGCTGCACCTATTAAGATGGTGACTCAGGCTAAGCAGTGGCTTCACAAGAACAAGGTCTGTGATGGTTACACAGTTGTGGAAGAGAAAGGGTGTTTGGTGCTTGGCTGGAAATCAAGGCCAATTGTTGCAGCTTCTTGCTGGAAATGCTGA 1503 0.4371 MSPSLYSAFKDEVHDENPITGLDLWPKGCYGYPHLPILDSSASTWILPFSDETIRDSKRVKIIGGSNFYSCLNSSRSNNSVNSMSMLHFRDHIRRYLDAEAVEEVAEDMNNSEGGGAEEDGSAEEIRLVQLLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLTLFQPLGPVGVTQSMMNIMDAASEEMEEAFRLVYEICPHIKFGHFVANSTILEAFEGESFVHVVDLGMSLGLPHGHQWRGLIQSLATRAGNRVRRLRITGVGLCIARLQIIGEELSVYANNLGINFEFSVVQKNLENLKPEDIEVNEEEALVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMDSLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAAPIKMVTQAKQWLHKNKVCDGYTVVEEKGCLVLGWKSRPIVAASCWKC* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04103 500 ProSiteProfiles GRAS family profile. 119 499 IPR005202 -
Rops2g04103 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 106 494 IPR005202 -
Rops2g04103 500 Pfam GRAS domain family 128 499 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04103 Rops-Chr2 74631185 74632687 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04103 120 500 GRAS Transcription Factor Family AT1G66350 37.662 8.09e-81 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops2g04103 GRAS 8.9e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04103 - - gmx:100815959 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04103 2 74631185 74632687 Rops2g04103 2 74631185 74632687 ECH