Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04098 ATGAAGAAGGTCACAGCAATTGTTTCATTTCTCATGATCTTAACACTTTGTTTTCAAGAATTCGTTCGTGTTTCTTCGTCGCCTCTCTTATACGGAAACCAGGTTTACGAGGAATCTTCTGGTGGAAGAAGTCTCAAACAGGAACAAGAACATGCTCCTGAAGTGCGTTGCTCCAGAGAGAGAAGTAAGGCAGCTCGGAAAGTAATCGAAGAGTATTTGACACCATTTGTGGAAGGAGAAAACTATCATCTTTCAAGACAGTGCAGACTTCACCCTGAAAATGATATATTCAGGGATCAGGAAGAACATAAAATTTACATAGATAGAAATGAATGGCGATGTGGATATTGTAAGAAAAGCTTCCGCGAAGAAAAATTTCTTGATCGGCATTTTGATAACAGACACTACAATCTTCTGAATCAAAGTAATGCTAAATGCTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTGTGATGAATTCCAAGTCCTCTAGAAGCAAGTGTAATCCGGCAGCTGCTGCAAGAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGTGAGGGTCCATCAGCAGGCCGTCTTCATGAATTGTTTCTGCACCAATTTTGTGACGCTCACACCTGCTCAGGGAAACAAAAACCATTCTCTAGAGGAGGCAAGGATCAAAGTAGTTTCTTCCGTCTAGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATTTGATACAAAGTGATATGAAGAATCGAACTCAGGAGCTTCGTCACATCTCAAAAGCTGGATGGAAAGCAAAGCCATCATAA 837 0.411 MKKVTAIVSFLMILTLCFQEFVRVSSSPLLYGNQVYEESSGGRSLKQEQEHAPEVRCSRERSKAARKVIEEYLTPFVEGENYHLSRQCRLHPENDIFRDQEEHKIYIDRNEWRCGYCKKSFREEKFLDRHFDNRHYNLLNQSNAKCLADLCGALHCDAVMNSKSSRSKCNPAAAARNRHLCESLADSCFPISEGPSAGRLHELFLHQFCDAHTCSGKQKPFSRGGKDQSSFFRLAAGALILVLLPVFYLFLYLIQSDMKNRTQELRHISKAGWKAKPS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04098 278 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 135 IPR013087 -
Rops2g04098 278 PANTHER ZINC FINGER PROTEIN-RELATED 5 277 - -
Rops2g04098 278 ProSitePatterns Zinc finger C2H2 type domain signature. 114 135 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04098 Rops-Chr2 74523572 74528215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04098 33 278 C2H2 Transcription Factor Family AT5G63280 61.694 1.20e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops2g04098 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04098 - - gmx:100780668 473.396