Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04089 ATGGGTGCCCAAACCATTTCCATCGACTTCCAGAACTCTCGGGTTTTACCCGAGTACGATGTTTTTATACACACTTCCGATGGAACACGCATTCCAGCCCACGCTGGCATTCTGGCTTCGGTGTCGCCGGTTTTGGAGAACATCATAGATCGACCACGGAAACATCGGAGCTCCGAAAGAATAATCCAAATTCACGGAGTTCCTGGCGACGCCGTAACGGCCTTCGTCGGCTTCCTTTACTCCTCCAGGTGCACGGAGGATGAGATGGACAAATACGGGATGCACCTGCTGGCACTGTCACACGTGTACATGGTGCCTCCACTGAAGCAGAGATGCATCAAGGGCTTATCACAGCGCTTGACCACAGAGAACGTGGTGGATGTGCTTCAACTTGCGAGGCTTTGCGACGCACCGGATCTCCACCTCCGCTGCATGAAGCTTCTCACCAATAACTTCAAAGCGGTTGAGAAAACGGAGGGTTGGAAGTTCCTCGTGAAACATGACCCCTGGCTTGAACTCGACATCCTTCGCTTCATGGACGAACGCGAAACGAGGAGAAATAAATCGAGGAGGTATAGGGAGGAACAGGGGCTGTACGCACAATTGAGCGAAGCCATGGAGTGTTTGGAACACATATGCACGGAGGGGTGCACCGACGTTGGACCGTACCATGTAGAGGTTCACAAAGAGAGGAAGCCGTGTAACAGATTCTCCACGTGTCAAAGTCTTCAGCTCCTGATCCGTCATTTTGCCACGTGTAAGAGGAGGATGAACGGAGGGTGCTTGCGCTGCAAGCGAATGTGGCAGCTCTTCCGACTCCATTCTTATATTTGTCAACAGACTGATTCCTGCGAGGTTCCTCTTTGCAAGCAATTTCAATTGAGAATGCAGCATGAGATAAGGAAAGATGATTCAAGGTGGAAACTACTAGCGAAGAAGGTGGTATCTGCCAAAGTCATGTCTTCCTTGTCTCAGTCAAAGAGGAAGCGAGATGAAGGAACGAAAGTGACGATAAACAATCCTGGGATCAGAAGTTTTAAGTTACAATAA 1050 0.499 MGAQTISIDFQNSRVLPEYDVFIHTSDGTRIPAHAGILASVSPVLENIIDRPRKHRSSERIIQIHGVPGDAVTAFVGFLYSSRCTEDEMDKYGMHLLALSHVYMVPPLKQRCIKGLSQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTNNFKAVEKTEGWKFLVKHDPWLELDILRFMDERETRRNKSRRYREEQGLYAQLSEAMECLEHICTEGCTDVGPYHVEVHKERKPCNRFSTCQSLQLLIRHFATCKRRMNGGCLRCKRMWQLFRLHSYICQQTDSCEVPLCKQFQLRMQHEIRKDDSRWKLLAKKVVSAKVMSSLSQSKRKRDEGTKVTINNPGIRSFKLQ* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04089 349 Gene3D - 121 193 - -
Rops2g04089 349 Pfam BTB/POZ domain 20 118 IPR000210 GO:0005515
Rops2g04089 349 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 17 330 IPR044513 -
Rops2g04089 349 FunFam BTB/POZ and TAZ domain-containing protein 2 192 318 - -
Rops2g04089 349 SUPERFAMILY TAZ domain 194 292 IPR035898 -
Rops2g04089 349 Gene3D TAZ domain 194 318 IPR035898 -
Rops2g04089 349 Gene3D Potassium Channel Kv1.1; Chain A 10 120 IPR011333 -
Rops2g04089 349 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Rops2g04089 349 Pfam TAZ zinc finger 203 289 IPR000197 -
Rops2g04089 349 SMART BTB_4 19 120 IPR000210 GO:0005515
Rops2g04089 349 CDD BACK 121 168 - -
Rops2g04089 349 SUPERFAMILY POZ domain 19 150 IPR011333 -
Rops2g04089 349 SMART TAZ_2 196 290 IPR000197 -
Rops2g04089 349 FunFam BTB/POZ and TAZ domain-containing protein 2 121 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04089 Rops-Chr2 74390272 74393738 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Rops2g04089 BTB 1.2e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04089 - - cam:101496955 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04089 2 74390272 74393738 Rops2g04089 2 74390272 74393738 ECH