Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04079 ATGTTTTTGTGTGTGGGCCAAAAAAAAGTTGGGTCAAAACGTAGGGCCAGATGGCCCAACCCGTGGGCTCAGGGCTGTTTTGACAGCTCTATTGGTGACTATGTGCCTTGGCTTGACTGGTTGACCCATGTTTCTGGAAACAGAGTGGCTAAACAGTTTGATGATTTATTGGAGAAAGTAGTTGAAGAGCATATAAATCGTCAGAAAGAAGCTAGCGATGGGCATTTTCGTTCAGATACGGAAGGTCACAATGATTTTGTTGACGTTTTGCTATGGATACAAAGGACAAACACAATTGGCATTTCCATTGACAGAACTGTCATTAAGGCTTTGATATTGGATATGTTTGCTGCAGGTACAGACACCATATCTACCTCACTAGAATGGACAATGACAGAACTCATAAGGCATCCAATTGCAATGAAGAAACTGCAAGATGAAGAGAGGAATGTGGCTGGTGATAGAACGCACATAACTGAAGAGGATTTGGGTCACATGCAATACTTAAAGGCTGTGGTTAAAGAAACTTTACGCTTACATCCCCCAAATCCAGTACTAGTCACACGACAAAGTATGGAGGATATTAAACTGAACGGCTACCATGTTAAAGCTGGCACACAAGTAATTGTCAATAATTGGACCATTGCAAGAGATCCTACATTCTGGGATCAACCTGAAGATTTCAAACCTGAGAGGTTCTTGAATAGTTCAATAGATGTTAAAGGGAAAGATTTCCAATTGATCCCATTTGGAGCAGGGAGAAGGGGTTGCCCAGGGACAATGTATGCTATGGTTATCAATGAGCTTGTGCTAGCCAACCTTGTCCACCAATTTGATTGGGTATTACCCGGTGGAGCTGAAGGAGTAGCGACCTTGGACATGTCCGAAACAGTTGGCTTAACCATGCATAGAAAGAATCCCCTTATTGCAGTTGCAGCCCCCAAATAA 948 0.4272 MFLCVGQKKVGSKRRARWPNPWAQGCFDSSIGDYVPWLDWLTHVSGNRVAKQFDDLLEKVVEEHINRQKEASDGHFRSDTEGHNDFVDVLLWIQRTNTIGISIDRTVIKALILDMFAAGTDTISTSLEWTMTELIRHPIAMKKLQDEERNVAGDRTHITEEDLGHMQYLKAVVKETLRLHPPNPVLVTRQSMEDIKLNGYHVKAGTQVIVNNWTIARDPTFWDQPEDFKPERFLNSSIDVKGKDFQLIPFGAGRRGCPGTMYAMVINELVLANLVHQFDWVLPGGAEGVATLDMSETVGLTMHRKNPLIAVAAPK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04079 315 Gene3D Cytochrome P450 16 311 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 SUPERFAMILY Cytochrome P450 30 312 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PANTHER CYTOCHROME P450 71B11-RELATED 30 312 - -
Rops2g04079 315 PRINTS P450 superfamily signature 171 182 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS P450 superfamily signature 248 257 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS P450 superfamily signature 118 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 250 259 IPR017972 GO:0005506|GO:0016705
Rops2g04079 315 FunFam Predicted protein 116 310 - -
Rops2g04079 315 Pfam Cytochrome P450 34 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS E-class P450 group I signature 107 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS E-class P450 group I signature 127 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS E-class P450 group I signature 211 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS E-class P450 group I signature 170 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS E-class P450 group I signature 257 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04079 315 PRINTS E-class P450 group I signature 247 257 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04079 Rops-Chr2 74265292 74266774 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04079 30 313 Cytochrome P450 AT3G48270 45.172 2.95e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04079 - - gmx:100813357 376.711