Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04078 ATGGAGGGTGAGAAAGAAGCAGGGATGGTGATTGACTTGGTGAATGAGATAGCTAGCATCTCTGACTTCAGGCCTATGGTGAAGAAGCAGTACTGTAACTTGGCTCGTAGGTTGAAGCTTTTGATCCCTTTGTTCGAGGAGATTAAGGAGATGAAAGAGACAATCCCTGATGACACTTCGAAAGCCATGCTTGCCTTCAAGGAAGCTCTCGAATCCAACAGGGAACTACTCAGATTCGGAAGTGAAGGCAGCAAAATTTACATGGTCTGGAACTTTGAAGCTTTACAATGCTTGCAGATGCTAACAGATCATTTCCTTTTATCTTGTTCATGGAACACAACAGTGAAGACCTATACTTTTTTTCCAGACCACCAACTAATTTGCTTTTTGCAATTTGAAGAAGTTGATATTGATGGTGTTCCTAATTACTTAACAACATCACCGGATTTGCTATCAGAGAGTGAATGCCTTGACCAGTTGTCAACTTCTGAGGACTCTGAAGTGGATTGGACATTCAGATATGATGTAGATCACAGTCCTTGA 543 0.4162 MEGEKEAGMVIDLVNEIASISDFRPMVKKQYCNLARRLKLLIPLFEEIKEMKETIPDDTSKAMLAFKEALESNRELLRFGSEGSKIYMVWNFEALQCLQMLTDHFLLSCSWNTTVKTYTFFPDHQLICFLQFEEVDIDGVPNYLTTSPDLLSESECLDQLSTSEDSEVDWTFRYDVDHSP* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04078 180 Gene3D - 6 99 IPR036537 GO:0007166
Rops2g04078 180 FunFam RING-type E3 ubiquitin transferase 4 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04078 Rops-Chr2 74262990 74265174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04078 1 93 U-box Gene Family AT3G46510 55.789 1.74e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04078 - - gmx:100815575 133.65