Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04072 ATGCACAGAATGTTGTTTTCTACCATTTATCTATCACTTTTCTTTTTTTTCAGTGTCCTCTTTGTGTTTAAGCTGGCAAGAAGAACCAAAACCAAGCTGAATCTGCCTCCATCTCCACCAAAACTACCATTCATCGGTAATCTTCATCAGTTAGGCACACTGCCATACCACTCTTTTCGAGACCTCTCACTCAAATATGGTGATATGATGATGCTGCAGTTGGGGCAGATGAAAAATCCAACTCTGGTGGTTTCATCTGCAGATGTGGCCATGGAAATGATAAAAACTCATGACCTGACTTTTTCGAACCGACCTCAAATGACAGCTCCAAAAATCTTATTGTACGGATGTAAGGACGTTGGGTTTGGACCTTATGGAGAAGACTGGAGACAGAAAAGAAAAATAATTGTCCTTGAACTCCTGAGCTTGAAAAGGGTGCAATCATTTCGTCTCATCAGAGAAGAAGAAGTTGCAGATTTAGTGAATAAGCTACGTGAAGCAAGTTCAAGTGATGCACGCTCCGTGGATCTGAGTGAGATGCTTATTTCAACAGCAAACAATATCGTGTGTAAATGTGCTCTGGGACGGAAGTACGGAGGAGATAATAATAACAGGGTCAAAGAGTTAGCAAGGGAAATTATGATTCATCTTACAGCTTTCACTGTGAGAGATTATTTCCCTTTGTTTGGTTGGATTGATGTTCTCAGTGGAAAAATTCAGGAATTCAAGACAACTTCTAGAGCACTGGACGCTTTATTTGATCAGGTAATTGCAGAGCATTTGGCAGCGAAGAAGACGGAAAGTGACCGCTCCAAAAGGAAAGACTTTGTGGATATCCTCCTCCAACTTCAAGAGGAGGGCATGCTTAACTTTGAGCTCACCAAAAATGACATCAAAGCACTTCTAACGGATATGTTTGTGGGAGGAACAGACACAACTGCTGCAGCATTAGAATGGGCTATGTCAGAGCTCGTGAGACATCCAATCACCATGAAGAAAGCACAGGAAGAAGTGAGAAAAGTTGTAGGTCATAAATCAAAAGTAGAGGAAGATGATGTCAATCAAATGCACTATCTAAAGTGTGTAGTCAAAGAAATTCTCAGGTTACATCCACCCACTCCTCTTTTGGCTCCTCGAGAAACAATGTCTAGTGTGAAATTGAAAGGATACGATATTCCTGCAAAAACAATGGTATATATCAATTCCTGGGCAATTCAAAGGGACCCTGAATTTTGGGAAAACCCAGAAGAGTTCCTGCCTGAGAGATTTGAAAACAGCCAAGTTGATTTTAAAGGTCAAGACTTTCACTTTACTCCATTTGGTTTTGGGAGAAGGGGATGCCCTGGAATGAATTTTGCAATGGCTTCTGTTGAGTATGTGCTTGCTAACCTTCTTTATTGGTTCGATTGGAAGTTGCCTGAAGATACACGTATACGAGACATAGATATGAGCGAGATATTTGGACTTGTTGTCTCGAGGAAAACACCACTTCATCTTAAACCAATCACCTTTCCATTTTAA 1521 0.4083 MHRMLFSTIYLSLFFFFSVLFVFKLARRTKTKLNLPPSPPKLPFIGNLHQLGTLPYHSFRDLSLKYGDMMMLQLGQMKNPTLVVSSADVAMEMIKTHDLTFSNRPQMTAPKILLYGCKDVGFGPYGEDWRQKRKIIVLELLSLKRVQSFRLIREEEVADLVNKLREASSSDARSVDLSEMLISTANNIVCKCALGRKYGGDNNNRVKELAREIMIHLTAFTVRDYFPLFGWIDVLSGKIQEFKTTSRALDALFDQVIAEHLAAKKTESDRSKRKDFVDILLQLQEEGMLNFELTKNDIKALLTDMFVGGTDTTAAALEWAMSELVRHPITMKKAQEEVRKVVGHKSKVEEDDVNQMHYLKCVVKEILRLHPPTPLLAPRETMSSVKLKGYDIPAKTMVYINSWAIQRDPEFWENPEEFLPERFENSQVDFKGQDFHFTPFGFGRRGCPGMNFAMASVEYVLANLLYWFDWKLPEDTRIRDIDMSEIFGLVVSRKTPLHLKPITFPF* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04072 506 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 Gene3D Cytochrome P450 21 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 FunFam Cytochrome P450 83B1 22 500 - -
Rops2g04072 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Rops2g04072 506 PANTHER CYTOCHROME P450 71B11-RELATED 20 502 - -
Rops2g04072 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g04072 506 CDD CYP71-like 65 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04072 Rops-Chr2 74198773 74201701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04072 36 501 Cytochrome P450 AT3G26330 46.497 6.30e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04072 K20617 - gmx:100781909 768.459