Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04059 ATGGAATCCAAACCCTCACATAATAATACTATTAAGTTCCTCTATAGCTACGGTGGCAAGATCCTTCCTCGTCACACCGACGGCAACCTTCGTTACACCGGCGGCCACACCAGAGTCCTCGCCCTCCATACTCCCATCTCTTTCTCAGAGTTAATGGTGAAGCTCTGCGAGTTGTGTGGTTCATCGGTTACTCTCAAGTGTCCATTGCCTAACGGAGACTTTGAGACCTTGATTTCGATCACCAATGACGAGGATCTCGCCAATATAATTCAGGAATACGATCGAGCTTCTTCTTCGTTAGCTCATCCCTTGAAGATCAGAGCCCTTCTTTCGCCGCCCAAGAAATTATCTCCTCCTCCTCCGTCCTCTTTGTCAAGCTCCGCTCATTCTTCGTCCGGTTCGCCTCACTCTTCAGCCGAATCCTCGCCGTATTTGGCGGCGCATCGGTTCAACCGCCGGAATTGCTCGCCGGGCCCGCTTGGGTATCCGATTGGTGTATGTAACGAAGCGGAGGAGAGCCTGCAAAGTATGACCAAGATTACCTTAATCATAACGTTGTTGGTTTCCTTGGCCGTGTCCTATTTTGTCTCTGTGTCATTGGATCGGAGAGTTGAAGGATTCAATTTAGCAGTGCCGCTTCCCCTTCTTGGCGTGGCCATCACTGTGACTGTTGCATTAGTGATGATCTTGGCTTTCCGAGCTACCATGGTTACATGGATCACTGTCTTGGTGCTGCTAGCCTTTGCAGGAAACCGTCGAAAGGTTTTGGTTCAACGAGGTAGGCAAATAACCCTTGATGTGGCATGCTATTTGGTCAGCGTTATATTCAGATCACCGAAGGGCCTCTTTGCCCTCGCTTGTGCCACTATCTTCAGCTTGTTGGCCACCTATCGATGA 897 0.4983 MESKPSHNNTIKFLYSYGGKILPRHTDGNLRYTGGHTRVLALHTPISFSELMVKLCELCGSSVTLKCPLPNGDFETLISITNDEDLANIIQEYDRASSSLAHPLKIRALLSPPKKLSPPPPSSLSSSAHSSSGSPHSSAESSPYLAAHRFNRRNCSPGPLGYPIGVCNEAEESLQSMTKITLIITLLVSLAVSYFVSVSLDRRVEGFNLAVPLPLLGVAITVTVALVMILAFRATMVTWITVLVLLAFAGNRRKVLVQRGRQITLDVACYLVSVIFRSPKGLFALACATIFSLLATYR* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04059 298 Gene3D - 31 110 - -
Rops2g04059 298 SUPERFAMILY CAD & PB1 domains 27 115 - -
Rops2g04059 298 MobiDBLite consensus disorder prediction 111 141 - -
Rops2g04059 298 CDD PB1_UP2 16 108 - -
Rops2g04059 298 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Rops2g04059 298 PANTHER OS05G0427100 PROTEIN-RELATED 3 153 - -
Rops2g04059 298 MobiDBLite consensus disorder prediction 121 141 - -
Rops2g04059 298 SMART PB1_new 25 113 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04059 Rops-Chr2 74027659 74037431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04059 11 120 MAP Kinase Kinase Kinase AT1G04700 41.818 1.28e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04059 - - gsj:114393520 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04059 2 74027659 74037431 Rops2g04059 2 74027659 74037431 ECH
Rops2g04059 2 74027659 74037431 Rops10g00698 10 17159157 17160211 PCT