Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04055 ATGGAAGATGAGGATCGCAACCCAAAAGAAGCAAAGGATTACTATTCTAGATCAATATGGTGGTCAGAAACTGCACAGGCAGTTGGGGATCTCAAGAGAAGTGACATAAATGGAGTTAATGGTATCTATTTTGCTGCTGGAAGAGATTACTCACTAGAAATTGTGACTCCCGAAATTTCTGAAACATATGGTGAGCTCAAAGGTTTAACTAGTACCCGAGACATAGTTAATGAAATCTCCGAGGCTGGTAGTGAAGAAAACGGTGACTATGGTCACTATTCTAGACATTTATTGTCAACAGAAATTGTGGAAATAGTTGAAGATGGCAAAAGCATAACAACCAACAAAGATAGAAGAGTTGATGACCTTTATGTAGCTGTTGGAAAAGATGACTTGGACGTAGTGAAATGGGCTCTTGATCATGCTGTTTCTCCTGGTGCTCGGATTTTTCTTGTCCATGTCTCTCCTCCAATCACATTGATTCCTACTCCAGTCGGGAAGTTTGAAAGAAGCCAACTGAGCCAGCAACAAGTAAGACTTTATATTAATGAAGTGAACATCAAGAGGAAGGATCTTTTGCATAAGTACATCCAGCTGATTACTGAAGCCAAGGTAATTGCAGAAACGTTGCTTCTGGAGAGCAATGACACAGGAAAAGCCATTCTGGATCTCATCTCTATTCTTAACATTACCAACCTTGTCATCGGAATCAAAAAGCTACCCTATACACGGTGCAATAATAAATTGAGCGAAGGAGAGTTCGTAAAGAAAAATGCACCGAAGTCCTGTGACGTTACCTTGGTTTATAATGGCGAGGTGTTTGTGTCTGACCCTTTGACATCCCATGGCCTAGTATCACAAAGTAAAGGTCACTCAAAAAACAACTTCTTTCAGTGTATGTGCTTTTCAGGGTGCATGAGAGAAGACAAGGATAATTGA 939 0.4036 MEDEDRNPKEAKDYYSRSIWWSETAQAVGDLKRSDINGVNGIYFAAGRDYSLEIVTPEISETYGELKGLTSTRDIVNEISEAGSEENGDYGHYSRHLLSTEIVEIVEDGKSITTNKDRRVDDLYVAVGKDDLDVVKWALDHAVSPGARIFLVHVSPPITLIPTPVGKFERSQLSQQQVRLYINEVNIKRKDLLHKYIQLITEAKVIAETLLLESNDTGKAILDLISILNITNLVIGIKKLPYTRCNNKLSEGEFVKKNAPKSCDVTLVYNGEVFVSDPLTSHGLVSQSKGHSKNNFFQCMCFSGCMREDKDN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04055 312 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 131 240 - -
Rops2g04055 312 Gene3D HUPs 125 250 IPR014729 -
Rops2g04055 312 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 83 306 - -
Rops2g04055 312 Pfam Universal stress protein family 132 239 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04055 Rops-Chr2 73987137 73989364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04055 121 276 U-box Gene Family AT3G61390 29.518 7.76e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04055 - - pvu:PHAVU_003G204300g 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04055 2 73987137 73989364 Rops2g04055 2 73987137 73989364 ECH