Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04018 ATGCAGAGAGCGTTTTTATCTCTCTCTTCCAAACCCCTCTTTCTCCACAAACCTCGTACCCACTTCCTCACTACCCATGTCTCTGCTTTTAAACTAAACAACGTCAATGCCACTTTCTCTTCCTCTTCCTTCCCACGCACTCTTCTTTCTTCTTCTTCTTCCTCTTCCTCTTCCAAACTCATTCCATGGAAACGCCTTCCTTCCTCTCAGGTCAACGCAACCGCCACCACCACCGCTGACTCCTCTGGCAACAGTTTGTTAAAAACTCTAGAACTTGGAGCCCTGTTTGGCCTATGGATCCTCTTCAACATCTACTTTAACATTTACAACAAACAGGTCTTGAAGGTGTACTATTTCCCTGTAACTGTCACTGTTATTCAGTTTGCTGTTGGGACTCTCCTTGTGTCCTTCATGTGGGGTTTTAATCTCTATAAGAGGCCAACACTTAGTGCTGCCCAGCTTGCTGCTATATTTCCACTGGCTCTGGTACATACTTTAGGGAACCTTTTCACTAATATGAGTCTGGGAAAGGTTGCTGTGTCTTTCACTCATACCATTAAAGCTATGGAGCCTTTCTTTTCCGTACTCCTGTCTTCTGTGTTCCTTGGAGAGATGCCTACAGCATGGGTGGTTGCTTCCCTTGTGCCTATTGTTGGTGGGGTGGCACTGGCATCTGCCACGGAGGTCTCTTTCAATTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATTTAACAAATCAATCCCGTAATGTTCTTAGCAAAAAGCTCATGGTTAATAAGGAGGAATCCATGGACAACATAACCCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTATCAGCACCTCTAATCTTCATGGAGGGCGTCAAATTTACACCTGCTTACCTGCAATCCGCCGGATTAAATGTTCAACAAGTGTACATTAGATCTCTTCTTGCTGCACTCTGTTACCATACATATCAGCAAGTTGCTTATATGATACTGCAGAGGGTATCACCTGTTACCCATTCTGTGGGAAACTGTGTGAAGCGGGTCGTGGTTATTGTGAGCTCTGTCATCTTTTTCCAAACACCTGTCTCACCAATTAATGCATTTGGAACTGCTATAGCTCTTGCAGGTGTTTTCTTCTACTCCAGGGCAAGGCGAATTAAGTCAAAGACAGATTGA 1170 0.4427 MQRAFLSLSSKPLFLHKPRTHFLTTHVSAFKLNNVNATFSSSSFPRTLLSSSSSSSSSKLIPWKRLPSSQVNATATTTADSSGNSLLKTLELGALFGLWILFNIYFNIYNKQVLKVYYFPVTVTVIQFAVGTLLVSFMWGFNLYKRPTLSAAQLAAIFPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSSVFLGEMPTAWVVASLVPIVGGVALASATEVSFNWAGFWSAMASNLTNQSRNVLSKKLMVNKEESMDNITLFSIITVMSFLLSAPLIFMEGVKFTPAYLQSAGLNVQQVYIRSLLAALCYHTYQQVAYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPINAFGTAIALAGVFFYSRARRIKSKTD* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04018 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 303 383 - -
Rops2g04018 389 Pfam Triose-phosphate Transporter family 91 379 IPR004853 -
Rops2g04018 389 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 90 387 IPR004696 GO:0016020|GO:0022857|GO:0055085
Rops2g04018 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 137 225 - -
Rops2g04018 389 PANTHER SOLUTE CARRIER FAMILY 35 91 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04018 Rops-Chr2 73494136 73497661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04018 19 387 Antiporters AT5G33320 66.319 2.57e-167 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04018 K15283 - gmx:100780925 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04018 2 73494136 73497661 Rops10g00661 10 16332425 16336753 ECH
Rops2g04018 2 73494136 73497661 Rops2g04018 2 73494136 73497661 ECH
Rops2g04018 2 73494136 73497661 Rops10g00661 10 16332425 16336753 PCT