Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03984 ATGCGCAGCATTAGACTTGAAGCCCAGCAGAAATGTGGTGTTGGCAATTTGAAGTACTCATCTTCACAATCTCCTTTCTCTGCATTCCAAACTCCTAATGATGGTAATATTAGTAACGAGAAAGAAGCAACAACATCATCGTCATCTCTTAGCAGTATTTTACTGGTTATAATAGTTCTAGCAGTTATCTTCTTTGTGTATGGACTTGTCCACTTGGTTCTATGGTTTGTGATGAAAAGGCCATCATCAGCTTCATCTCTTTATAATTCCACTAGATTCTCAGAAGCCACACGAACCCGTGCTCTTCAAAGGCAGCTTCAACAACTCTTCCGCTTGCATGATTCAGGTCTAGACCAAGCTCTCATAGATGCTCTACCTGTTTTCCACTACCAGGATTTGATGGGTTTGAAGGAACCCTTTGATTGTGCTGTGTGTCTATGTGAATTTTCAGACCATGACAAGCTGAGGTTGCTTCCCATGTGTAGCCATGCCTTTCACATGAATTGCCTTGACACATGGCTTCTCTCAAATTCTACATGTCCTCTCTGTAGAGCAACTCTCACCAGCTCATATTTCCCTGTGGAGAATCCAATATTTAATATTGACAATCCCTTGCTTCTGCCAAATGGGTTCAGAGTCACGGGTGAGGAAGAGAAGGGGTGTTCTTCAGATAGTCAAAGACTAGAAGAACAAATTAGTGAGAAAAGGGTGTTTTCTGTGAGACTTGGAAAATTCAGAAATAGTGGATTGGAGGGTAGAGAAGTGGTAGAGGATAGTAGTTGTAGTTTGGATGCGAGGAGATGCTACTCTATGGGTTCATATCAGTACGTTGTTCGTGACTCAGATTTGCAAGTGCTCTTATCTCAATCTAATGATAACAAAGGAGGTGATGAAGAAAATGAGGTGAGGAATGGGAATGTGGAGGGAAAGAGGATGATAGGCAACACAACCAAAGGTGAGAGCTTCTCTGCTTCCAAGATTTGGCTTTGGTCCAAAAGGAGCAAATTTCATAGTTCTAATGCTGCTTTCCCTTGA 1035 0.4193 MRSIRLEAQQKCGVGNLKYSSSQSPFSAFQTPNDGNISNEKEATTSSSSLSSILLVIIVLAVIFFVYGLVHLVLWFVMKRPSSASSLYNSTRFSEATRTRALQRQLQQLFRLHDSGLDQALIDALPVFHYQDLMGLKEPFDCAVCLCEFSDHDKLRLLPMCSHAFHMNCLDTWLLSNSTCPLCRATLTSSYFPVENPIFNIDNPLLLPNGFRVTGEEEKGCSSDSQRLEEQISEKRVFSVRLGKFRNSGLEGREVVEDSSCSLDARRCYSMGSYQYVVRDSDLQVLLSQSNDNKGGDEENEVRNGNVEGKRMIGNTTKGESFSASKIWLWSKRSKFHSSNAAFP* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03984 344 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Rops2g03984 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 191 IPR013083 -
Rops2g03984 344 CDD RING-H2_EL5-like 141 184 - -
Rops2g03984 344 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 49 328 - -
Rops2g03984 344 MobiDBLite consensus disorder prediction 289 315 - -
Rops2g03984 344 FunFam RING-H2 finger protein ATL46 104 189 - -
Rops2g03984 344 SMART ring_2 142 183 IPR001841 -
Rops2g03984 344 Pfam Ring finger domain 141 184 IPR001841 -
Rops2g03984 344 SUPERFAMILY RING/U-box 121 190 - -
Rops2g03984 344 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03984 Rops-Chr2 72843295 72844329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03984 68 341 C3H Transcription Factor Family AT2G18650 42.038 6.60e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03984 - - ccaj:109807149 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g03984 2 72843295 72844329 Rops2g03984 2 72843295 72844329 ECH