Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03980 ATGGGATTGAGACGCTATTTGTTGGAAAGTACTCCATTTGTAGCCATGGTGATTGTGGAGTGCCTTGATGTGGGGTTGACCACATTGAGTAAAGCAGCAATGTCCAGAGGAATGAGCCACTTCGTCTTTGTTGTCTACTCCAATGCTCTTGCCACTTTGATACTCCTCCCTTCCTCTTTCATCTTCAACAGAACAAGACCACCCCTTTCTTTCTCGCTTCTCTGCAAATTCTTCCTCCTCGGCCTTGTTGGCATAACTATCATGCAAAATTGTGTTTTCACCGGCATAAGCTATAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTAACTCCAGCAATCACTTTTGTGCTAGCGGTCATCTTCAGGATGGAGAAGTTGGATATTGGAAGCTCAATAAGCCAGGTCAAAATCATTGGTGCAGTGCTGTCGATCTCAGGAGCATTAGTGGTGACCCTTTACAAGGGCGCTCCCATTGGTAGCTTTCAAGTTCAACCCTCACCATCGCAACCATTGCCATCTCTGTTGGCAGAAACCAGTAACTGGTTCATTGGGGGTCTCTTCCTTGCCACTGCCTCTGTATCCCTTTCACTATGGAATATTGCTCAGGCAGCAATTCTTAAAGGGTATCGATCTCAGTTGACAATAGTAGCTTTCTATTGCCTGTTTGGAACCATCCAATGTGCAATACTTTCTCTGATTGTAGTCAGAGATACAAATGCCTGGAAGCTAAGGCCTGACATTGAGCTCATCTCCATATTCTATTCAGCTGCTTTCGGAAGTGTGGTGACGTTTTCTGTACTGACTTGGTGCATAAGTAGGAAAGGACCTGTGTTTGTTACCATGTTCAAGCCTGTGGGGATCGCCATTGCTGCCTTTATGAGTTCTGTCTTCCTTGGTGAAACACTTCATGTTGGCAGTGTCATTGGCGCATTAGTCATCGTCATCGGATTTTACACAGTACTGTGGGCACAATCCAAAGAGAGAAATGTGAATGGCCTCGAAGTTGATAGACTATCATCCCCGTCTGCTCAAGCAAGTCCTCTACTAGAGTCGCCATGA 1062 0.4567 MGLRRYLLESTPFVAMVIVECLDVGLTTLSKAAMSRGMSHFVFVVYSNALATLILLPSSFIFNRTRPPLSFSLLCKFFLLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMEKLDIGSSISQVKIIGAVLSISGALVVTLYKGAPIGSFQVQPSPSQPLPSLLAETSNWFIGGLFLATASVSLSLWNIAQAAILKGYRSQLTIVAFYCLFGTIQCAILSLIVVRDTNAWKLRPDIELISIFYSAAFGSVVTFSVLTWCISRKGPVFVTMFKPVGIAIAAFMSSVFLGETLHVGSVIGALVIVIGFYTVLWAQSKERNVNGLEVDRLSSPSAQASPLLESP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03980 353 Pfam EamA-like transporter family 24 152 IPR000620 GO:0016020
Rops2g03980 353 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Rops2g03980 353 PANTHER WAT1-RELATED PROTEIN 12 329 IPR030184 GO:0016020|GO:0022857
Rops2g03980 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 327 - -
Rops2g03980 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03980 Rops-Chr2 72809354 72815267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g03980 4 350 Nodulin-like Gene Family AT5G40240 46.067 3.55e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03980 - - psat:127073896 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00881 1 21315584 21319036 Rops2g03980 2 72809354 72815267 ECH
Rops2g03980 2 72809354 72815267 Rops2g03980 2 72809354 72815267 ECH