Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g03975 ATGCATGGTGGTGGGTGTGGAGGTGAAGAGAGGAAACGGAGGATTCGGCACATGTGGAAATCATCCACACGTGTAAGCGCTGATGTTTCTCCTTCTTCGTCTTCTGTTAATTCGTTCTATAAGGATGGTCGCAAAATTAGTGCTGGTGACTGTGCTCTCTTCAAATCACGTAAAGATTTCCCACCTTTCATCGGAATAATTCGTTGTGTGACTGTTGATAAAGAGAATAAGTTAAAGCTAGGTGTTAATTGGCTTTATCGGCCCATTGAAGTAAGACTTGGCAAGGGTGTGCAGTTGGAGACTGCTCCAAACGAAATTTTCTACTCCTTTCATAAGGATGAGATTCCTGCTACATTGCTGCTTCATCCTTGTAAAGTTGCATTTCTCACAAAAGGTGCTGAGCTTCCGTCAGGGACATCCTCATTTGTATGCAGGAGGGTTTATGACATTGCGAACAAGTGTTTTCGGTGGCTAAGTGATCGAGTTTATATTAATGATTGCCAAGAAGAAATAGATAAGCTGTTATACAGGACTTGTGTAGAAATGCATGCAACAGTGCAGCGAGGAGGCCGATCTCCTAAGCCAGTGAGTAGTCCGACATCAACATCTCAGTTAAAATCTGGTTCAGATAGCATCCAGAACAGTGTTTCTTCCTTTTCTTCTCAAGTTAAGGGTAGGAAGAGGGAGAGGGCTGATCAAGGGCCAGAGTCTGTGAAGCGAGAACGTTCAGCAAAAAATGATGATGGAGATTCTGGTCATGTTAGGCAGGATAGCATTTTAAAGACAGAGATTGCTAAAGTTACAGAAAAGGGAGGGCTTGTTGATACTGAAGGGGTAGAGAAATTAGTGCAGCTAATGATTCCTGATAGAAACGAGAAAAAGATTGATTTAGCTAGCCGGTCAATGCTTGCCGCAGTTATTGCAGCAACAGATAAGTTTGATTGCCTTAATCGGTTTGTGCAACTGAGGGGTCTGCCTGTATTTGATGAATGGCTCCAGGAGGCTCATAAAGGGAAGACTGGTGATGGTATTGGGTCTAGGGATGGTGATAAATCTGTTGATGAATTTCTTTTGGTGTTACTCCGGGCACTGGATAAGCTTCCAGTAAATCTGCAGGCTTTACAAGCATGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTCAGAAATTCAGAAGAAAGCAAGGGGCTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGATTATAAATGATGAAAAGGCTGGTACAGTTCAGACTGTCCCCTGGCCTGCCAAACAACGCCTTCCTGAAGTTGCTCAAGGTGGGAACAGACATTCAGGTGGGTCCTCTGATGTTGCCATGAAGAGCTCAGTTACACAGCTTTCTGCTTCCAAAAATGCCTCTGTGAAGATTGTCCAGGGAGAGAATACTACCAGATCTCCATCAACATCTGCATCTCCGGGGTCTGCGAAATCAGTGCTGTCACCTGCATCTGCAAGTACAAACTTAAAGGATGGACAGCCCCATGTTGCTGCTATTAGTGGCTCCTCTGATCTACCTGTGGCGAATGCAAGGGATGAGAAGAGTAGCAGTTCTAGTCAATCTCACAACAACAGTCAGTCTTATTCCAGTGACCATGTGAAAGCTGGGAGACTTTCAGGAAAGGAGGATGCCAGGAGCTCTACTGCAATAAGTATGAATAAGGTATCAGGTGGCTCTTCTCGGCACCGGAAATCTATGAATGGATTTCCAGGTTCGACTCCATCTAGAGGGCAAAGGGAAACCGGGTCAAGCAAAAATTCCTCCTCACACAAAAATTTAACTTCAGAGAAAAAATCTCAATCTGGATTAAAGGAGAAAGCACTCGATGGAACTTCTCTTGAGGGGCACATTCCCAAGCTGATTGTTAAGATCCCGAACCGAGGTCGAAGTCCTGCACAAAGTGCCAGTGCAGGTTCTTTTGATGATCCTTCAATTATGAACAGTCGAGCTTCGTCTCCTGTGCTTGCAGAGAAGCATGATCAGTTTGATCGCCGCTCAAAGGAAAAGAGTGATTTTAACCGAGCTAATATTACTGCAGATATTAATACAGAATCCTGGCAGAGTAACGATTTCAAAGATATATTGACTGGGTCTGATGAGGGTGATGGATCGCCAGCGGCCATTACGGATGAAAAACACTGTAGGACTGGCGACAATTGCAAGAAAATATTAGATGTGTCAAAGGCTGCTTCCTCTTCATCTGGGAATGAAAGTAAAGCCTGGAATTTGCGGAATGCTTCTTACAGCTCCATTAATGCTCTAATTGAAGGTGTTAAATACTCTGAAGCTGATGATGTTGGCATGAATCTTCTTGCTAGTGTGGCTGCTGGAGAGATCCCCAAATCTGAATCAGGAATGCCAGCTGGATCCCCAGAAAAAAACTTCACTACTGTTGAACGGTCATGCACAGGTGATGCCGTAGTCAAGTTCTCTGGAGAAGATCTTGTTCAGGATAAGTGTTACTCAAATGATGGTGAAAATAAGAAGCAGGGTTCTATATCTGGTGATTTAGGGACAGATGATGATAATGATTCTGGTTTTCTGGCATCTGGAGGGGAATCTGCAGATCACAATATGGATACTAATTCATGTAGTATGGATTTGCAGGATACTGAAACTTGTTTAGAAAGCAAAGGAAAATTAATTGAAAAGCCAGCCGGTACTTCTTCTGCTGGCTTTCCAAAAAGCACCATCCAAGAAGGCAGAGATAGTGACTCTAGCAAACTGCTCAAGGAAAAGAAGATTGTTGAGGGAGTGGATGCAGTTGGAAATTTTGATGTTAAGGTCATTGATGTTGCAGGTGAAAGCAAGGCAGAAGCAATCGAAAAATCATCACACCCCTCCTTAGAAGTTGATCTCAAGAGTGATAACTGTTCTACTGAGGGATTAAGCAGTGGCAGAGAGACAACTAAGAAGTTGCCTGCCACTCATATGCAGATTGACTCTGCAAAAGGAACAGATGAGAATGTACTCCAGTCATCTGATGATATAGTCGATAAGGTTGCTGACGACCTAAACGCAAGGCAATCTGAAAAAGATGATGATATGTCTGTTCAGGATCATGCTAACCAGTCTAAAAAGCAAAGAAATGAGTCAGAAAGTGATGCTGTTATGCTGCCTGGGAATAGAGGTTTATGTTCAGGTGTGACTGGTCTTACTGCTGAATATATGGAAGAGAATTCAGGAACAAAAGAGGTTTATGACCTAGATGCTGGACAGATACCACACACAGTTTCACCTTGCCTTCCCTCACAAGAAATTGATCAGCAGATGGGTCCTAAAGGTTCAAAATTGGCTGTCATGGAAGTAGAGGAAGCAGAGGAATGCACCTCTACCACTGGAGATGCTTCTTCTGTGTCTGTTGCTGGTGCCTCAGATGTGGATGCAAAAGTTGAATTTGATTTAAACGAAGGGTTTAATGCAGACGACGGGAAATGTGGTGAGTTAAAAAGCATTGCTGTGCCTGGGGAATGTGCACCTGTTGTAAGATTGGTCAGTCCTGTTCCATTTTCTGCTTCATCTATGTCCTCTGGTATCCTCTCAATCACAGTAGCTGCTGCAAAGGGTCCATTTGTGCCACCTGAAGATCTATTGAGAAGTAAAGGGGAGCTTGGATGGAAGGGATCAGCTGCCACTAGTGCATTCCGGCCAGCTGAGCCCAGGAAAGTGATGGAAATGCCTCTTGGTACTACCCCTAGTCCTAATGGTGCAGCTAGAAAGCAGAGTCGGGCACCTTTGGATATTGACTTGAATATGCCTGATGAAAGAATACTTGATGATATTTCTTCTCAAAACTGTGCTCATCAGACAGATTGTGCATCTCATGCAGCCGATGGTCATGGTCCAAATAAATCAACACCCACACCTGTTTGTTGCTCAGGAGGACTTGGTCTTGACTTGAACCTAGTGGACGAGGCTTCTGATGTGGGCAATTGCACTGGGAGCAATAGTCATAAAATGGATGCACTGCTTCTGCAGGTGAAATCATCAGGTGGTGGTCCTCCAAATAAAGAAACAAGTGTCCGCAGAGATTTTGATCTGAATGATGGACCTGTAGTTGATGAAGTCACAACTGATCCATTGAGATCCACGCAGCTTGCCAGGAGCAGTTTGCCATCTCAACCACCTGTTTCTGGACTTAGGACGAGTAATGCACAAGTAGGGAACTTCTCATCATGGTTTCCTTCCAATGGGAACACCTATTCAGCTGTAACAATATCTTCAATTATGCCTGATAGAGGGGATAAGTCCTTTTCAATTGTTGGTCCTAATGGGCAACACAGGATGTTGGGTCCTGTAACTGGTGGCAACCCATTTGGTCCTGATATTTATAGGGGGGCAGTTTTGTCATCTCCTGCAGTTCCATATCCATCCGCGCCATTTCAGTATCCTGTCTTCCCTTTTAATTCCAGCTTTTCTCTTCCATCAGCATCATTTTCTGGTGGATCGACTACTTATGTAGATTCAACATCAGGAGGGAGACTTTGCTTCCCTGCAGTGAATTCTCAACTAATAGGGCCTGTCAGTACTGTTTCATCCCATTATCCCAGGCCTAATGTTGTTAGCCTCCCAGATGGTAGCAATAGTAGTAGTGCTGAGAGCAGTAGGAAATGGGCAAGGCAGGGTTTAGATCTTAATGCTGGACCTGGGAGTTCAGACTTGGAGGGGAGAGATGAGAGTTCACCTCTTGTATCACGGCAACTTTCTGTTGCTAGTTCGCTGGCCCCAGCTGAAGAGCAAGCTAGAATGTTCCATTTAGGCAGTGGTGTTCTTAAAAGGAAGGAACCTGATGGGGGCAGGGATGGCTACAAGGAATCATCGTGGCGGTACCAAAATTTGTAA 4881 0.4417 MHGGGCGGEERKRRIRHMWKSSTRVSADVSPSSSSVNSFYKDGRKISAGDCALFKSRKDFPPFIGIIRCVTVDKENKLKLGVNWLYRPIEVRLGKGVQLETAPNEIFYSFHKDEIPATLLLHPCKVAFLTKGAELPSGTSSFVCRRVYDIANKCFRWLSDRVYINDCQEEIDKLLYRTCVEMHATVQRGGRSPKPVSSPTSTSQLKSGSDSIQNSVSSFSSQVKGRKRERADQGPESVKRERSAKNDDGDSGHVRQDSILKTEIAKVTEKGGLVDTEGVEKLVQLMIPDRNEKKIDLASRSMLAAVIAATDKFDCLNRFVQLRGLPVFDEWLQEAHKGKTGDGIGSRDGDKSVDEFLLVLLRALDKLPVNLQALQACNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMIINDEKAGTVQTVPWPAKQRLPEVAQGGNRHSGGSSDVAMKSSVTQLSASKNASVKIVQGENTTRSPSTSASPGSAKSVLSPASASTNLKDGQPHVAAISGSSDLPVANARDEKSSSSSQSHNNSQSYSSDHVKAGRLSGKEDARSSTAISMNKVSGGSSRHRKSMNGFPGSTPSRGQRETGSSKNSSSHKNLTSEKKSQSGLKEKALDGTSLEGHIPKLIVKIPNRGRSPAQSASAGSFDDPSIMNSRASSPVLAEKHDQFDRRSKEKSDFNRANITADINTESWQSNDFKDILTGSDEGDGSPAAITDEKHCRTGDNCKKILDVSKAASSSSGNESKAWNLRNASYSSINALIEGVKYSEADDVGMNLLASVAAGEIPKSESGMPAGSPEKNFTTVERSCTGDAVVKFSGEDLVQDKCYSNDGENKKQGSISGDLGTDDDNDSGFLASGGESADHNMDTNSCSMDLQDTETCLESKGKLIEKPAGTSSAGFPKSTIQEGRDSDSSKLLKEKKIVEGVDAVGNFDVKVIDVAGESKAEAIEKSSHPSLEVDLKSDNCSTEGLSSGRETTKKLPATHMQIDSAKGTDENVLQSSDDIVDKVADDLNARQSEKDDDMSVQDHANQSKKQRNESESDAVMLPGNRGLCSGVTGLTAEYMEENSGTKEVYDLDAGQIPHTVSPCLPSQEIDQQMGPKGSKLAVMEVEEAEECTSTTGDASSVSVAGASDVDAKVEFDLNEGFNADDGKCGELKSIAVPGECAPVVRLVSPVPFSASSMSSGILSITVAAAKGPFVPPEDLLRSKGELGWKGSAATSAFRPAEPRKVMEMPLGTTPSPNGAARKQSRAPLDIDLNMPDERILDDISSQNCAHQTDCASHAADGHGPNKSTPTPVCCSGGLGLDLNLVDEASDVGNCTGSNSHKMDALLLQVKSSGGGPPNKETSVRRDFDLNDGPVVDEVTTDPLRSTQLARSSLPSQPPVSGLRTSNAQVGNFSSWFPSNGNTYSAVTISSIMPDRGDKSFSIVGPNGQHRMLGPVTGGNPFGPDIYRGAVLSSPAVPYPSAPFQYPVFPFNSSFSLPSASFSGGSTTYVDSTSGGRLCFPAVNSQLIGPVSTVSSHYPRPNVVSLPDGSNSSSAESSRKWARQGLDLNAGPGSSDLEGRDESSPLVSRQLSVASSLAPAEEQARMFHLGSGVLKRKEPDGGRDGYKESSWRYQNL* 1627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1532 1550 - -
Rops2g03975 1626 SMART BAH_4 44 159 IPR001025 GO:0003682
Rops2g03975 1626 MobiDBLite consensus disorder prediction 964 989 - -
Rops2g03975 1626 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 314 418 IPR035441 -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 442 506 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 832 874 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 669 687 - -
Rops2g03975 1626 ProSiteProfiles TFIIS N-terminal domain profile. 333 412 IPR017923 -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 186 257 - -
Rops2g03975 1626 Pfam TFIIS helical bundle-like domain 360 409 IPR017923 -
Rops2g03975 1626 SMART TFS2_5 332 411 IPR003617 GO:0005634
Rops2g03975 1626 Pfam BAH domain 46 155 IPR001025 GO:0003682
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1597 1626 - -
Rops2g03975 1626 CDD TFIIS_I 334 410 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1340 1395 - -
Rops2g03975 1626 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 277 413 IPR035441 -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 637 688 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 642 664 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 191 222 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 223 257 - -
Rops2g03975 1626 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1622 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 557 609 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 898 920 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1601 1617 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1371 1395 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 424 624 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1021 1055 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 610 624 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 954 989 - -
Rops2g03975 1626 Gene3D - 24 270 IPR043151 -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1532 1585 - -
Rops2g03975 1626 ProSiteProfiles BAH domain profile. 44 159 IPR001025 GO:0003682
Rops2g03975 1626 MobiDBLite consensus disorder prediction 1021 1046 - -
Rops2g03975 1626 MobiDBLite consensus disorder prediction 522 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g03975 Rops-Chr2 72762821 72768673 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Rops2g03975 BAH 6.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g03975 - - ccaj:109810746 2145.93